RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PMS2P2O95744 297 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 ACHEP22303 614 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 DNASE1L1P49184 302 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 CAPZA1P52907 286 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 C17orf67Q0P5P2 114 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 C4orf46Q504U0 113 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 LRFN4Q6PJG9 635 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 H1FNTQ75WM6 255 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF627Q7L945 461 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 KMT5CQ86Y97 462 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 KDM8Q8N371 416 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 OR13C3Q8NGS6 347 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 MFSD8Q8NHS3 518 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 DVL3Q92997 716 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 TMEM138Q9NPI0 162 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 G6PC2Q9NQR9 355 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 OR52A1Q9UKL2 312 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 SPAG17Q6Q759 2223 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 DCDC2BA2VCK2 349 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 LDLRAD4O15165 306 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 SIX6O95475 246 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 RAB3DO95716 219 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 CALCRP30988 508 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 APOBEC1P41238 236 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 DAP3P51398 398 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 C1orf100Q5SVJ3 147 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 TMEM244Q5VVB8 128 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 TSSK4Q6SA08 328 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 LANCL3Q6ZV70 420 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 TMUB2Q71RG4 321 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 DCXRQ7Z4W1 244 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 ST7LQ8TDW4 575 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 ASB10Q8WXI3 467 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 RBPMSQ93062 196 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 FOXRED1Q96CU9 486 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 CHST6Q9GZX3 395 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 SUSD2Q9UGT4 822 aa14.36□□□□□ -0.11
CHMP1A-202ENST00000535997 TMEM269A0A1B0GVZ9 245 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 LOC390937A0A1W2PQ73 354 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 GOSR2O14653 212 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 DOK2O60496 412 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 GLB1P16278 677 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 OC90Q02509 493 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 ADGRE4PQ86SQ3 457 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF501Q96CX3 271 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 TGIF2Q9GZN2 237 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 MYOZ1Q9NP98 299 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 FGF21Q9NSA1 209 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 MED9Q9NWA0 146 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 MED11Q9P086 117 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 MTCH2Q9Y6C9 303 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 VCANP13611 3396 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 ABCA7Q8IZY2 2146 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 ANKUB1A6NFN9 424 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 NPIPA5E9PKD4 350 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 H3BUI4 141 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 RP2O75695 350 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 B3GALNT1O75752 331 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF35P13682 527 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 CSNK1EP49674 416 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 CHMP1BQ7LBR1 199 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 NAXDQ8IW45 347 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 NKAIN3Q8N8D7 197 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 OR51A2Q8NGJ7 313 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 KCNK17Q96T54 332 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 POFUT1Q9H488 388 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF224Q9NZL3 707 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 CTSFQ9UBX1 484 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 CGGBP1Q9UFW8 167 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 NPIPA1Q9UND3 350 aa14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 ARID1BQ8NFD5 2236 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-202ENST00000535997 PRUNE2Q8WUY3 3088 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 LOC107986453A0A1B0GWG9 222 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 CYB5AP00167 134 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 PPP3CBP16298 524 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 MMP16P51512 607 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 CLVS2Q5SYC1 327 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 C11orf88Q6PI97 169 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 PRSS42Q7Z5A4 293 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 LYPD6Q86Y78 171 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 JAGN1Q8N5M9 183 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 ARL5BQ96KC2 179 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 CMKLR1Q99788 373 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 NKX3-1Q99801 234 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 ARL6Q9H0F7 186 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 FER1L5A0AVI2 2057 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 TMEM82A0PJX8 343 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF208O43345 1280 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 CD74P04233 296 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 FCER2P06734 321 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 OR4E1P0C645 316 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 UBCP0CG48 685 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 IL11P20809 199 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 SUMO3P55854 103 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 UBE2MP61081 183 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 SPOCK1Q08629 439 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 PMPCAQ10713 525 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 OR7A5Q15622 319 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms