RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ZNF583Q96ND8 569 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 HOPXQ9BPY8 73 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 EFCAB1Q9HAE3 211 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 FGFR1OP2Q9NVK5 253 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 TBCCD1Q9NVR7 557 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 RHCGQ9UBD6 479 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 CXCR6O00574 342 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 WNT9BO14905 357 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 PIP5K1CO60331 668 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 KHDRBS3O75525 346 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 VENTXO95231 258 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 CD14P08571 375 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 CFPP27918 469 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 RPS6KA3P51812 740 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 PRKCDQ05655 676 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 ZBED5Q49AG3 693 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 FGD3Q5JSP0 725 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 GPR139Q6DWJ6 353 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 C1orf94Q6P1W5 598 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 BTNL3Q6UXE8 466 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 RFPL4BQ6ZWI9 263 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 MBOAT2Q6ZWT7 520 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 POP5Q969H6 163 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 NABP1Q96AH0 204 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 ANKRD19PQ9H560 264 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 ZMAT3Q9HA38 289 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 MSL2Q9HCI7 577 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 SAR1AQ9NR31 198 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 POLE4Q9NR33 117 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 KIF17Q9P2E2 1029 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 PPP1R3CQ9UQK1 317 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 UGT2A1Q9Y4X1 527 aa11.25□□□□□ -0.61
CLSTN3-205ENST00000535452 LOC100509620A0A075B734 347 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 J3QW42 95 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 PRSS23O95084 383 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 NDUFB2O95178 105 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 CD55P08174 381 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 ADH4P08319 380 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 CPT2P23786 658 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 CRABP1P29762 137 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 MPV17P39210 176 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 WNT5AP41221 380 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 GPR4P46093 362 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 SRP9P49458 86 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 MMP15P51511 669 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 RAD23AP54725 363 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 LIPEQ05469 1076 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 SF3A3Q12874 501 aaKnown RBP eCLIP11.24□□□□□ -0.616e-9■■■■■ 32.1
CLSTN3-205ENST00000535452 FOXL1Q12952 345 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 NLRC3Q7RTR2 1065 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 ADCK1Q86TW2 530 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 TSPYL5Q86VY4 417 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 GLB1L2Q8IW92 636 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 C1orf87Q8N0U7 546 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 OR13C2Q8NGS9 318 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 PTP4A1Q93096 173 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 RCN3Q96D15 328 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 PLEKHA8Q96JA3 519 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 SAMD8Q96LT4 415 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 ZNF582Q96NG8 517 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 KCTD14Q9BQ13 255 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 CDADC1Q9BWV3 514 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 HCAR1Q9BXC0 346 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 WNT5BQ9H1J7 359 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 G6PC2Q9NQR9 355 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 TMEM106BQ9NUM4 274 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 IL19Q9UHD0 177 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 A4GNTQ9UNA3 340 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 AUP1Q9Y679 476 aa11.24□□□□□ -0.61
CLSTN3-205ENST00000535452 PPIAL4EA0A075B759 164 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 PPIAL4CA0A0B4J2A2 164 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 PRSS37A4D1T9 235 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 OR6C6A6NF89 314 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 ZSCAN5BA6NJL1 495 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 PPIAL4DF5H284 164 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 FXYD1O00168 92 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 SPRY1O43609 319 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 UBOX5O94941 541 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 SERPINA1P01009 418 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 H1F0P07305 194 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 TSPAN19P0C672 248 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 PPIAL4FP0DN26 164 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 SELEP16581 610 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 ADRA2CP18825 462 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 NOS3P29474 1203 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 IFNGR2P38484 337 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 MDH2P40926 338 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 SMIM11AP58511 58 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 BTG1P62324 171 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 KRR1Q13601 381 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 TMEM155Q4W5P6 130 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 JAZF1Q86VZ6 243 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 SEMA6DQ8NFY4 1073 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 MCUR1Q96AQ8 359 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 RASD2Q96D21 266 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 SLC6A7Q99884 636 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 MS4A7Q9GZW8 240 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 EMC7Q9NPA0 242 aa11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 PURGQ9UJV8 347 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-205ENST00000535452 SAMD4AQ9UPU9 718 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms