RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 SLC25A47Q6Q0C1 308 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 Q6ZVQ6 151 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 PGAP1Q75T13 922 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 TCTE3Q8IZS6 198 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 TMEM190Q8WZ59 177 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 FAM3CQ92520 227 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 DYRK2Q92630 601 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 NRGNQ92686 78 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 RBPMSQ93062 196 aaKnown RBP3□□□□□ -1.93
CSMD3-210ENST00000534172 DCPSQ96C86 337 aaKnown RBP3□□□□□ -1.93
CSMD3-210ENST00000534172 PELI1Q96FA3 418 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 DCUN1D1Q96GG9 259 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 C14orf144Q96I85 54 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 AKR1E2Q96JD6 320 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 AMDHD1Q96NU7 426 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 PGLYRP2Q96PD5 576 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 DCTN5Q9BTE1 182 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 UCK2Q9BZX2 261 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 ACTR6Q9GZN1 396 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 POLR3FQ9H1D9 316 aaPredicted RBP3□□□□□ -1.93
CSMD3-210ENST00000534172 NANOGQ9H9S0 305 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 CXorf21Q9HAI6 301 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 SLC25A19Q9HC21 320 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 ADAP2Q9NPF8 381 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 FBXO8Q9NRD0 319 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 C1orf123Q9NWV4 160 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 VAPAQ9P0L0 249 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 TMEM216Q9P0N5 145 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 GSTK1Q9Y2Q3 226 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 KCNIP3Q9Y2W7 256 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 MEMO1Q9Y316 297 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 GOLT1BQ9Y3E0 138 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 PALLDQ8WX93 1383 aa3□□□□□ -1.93
CSMD3-210ENST00000534172 A0A0A6YYH2 397 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 PPIAL4CA0A0B4J2A2 164 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MEIOCA2RUB1 952 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 NKX6-3A6NJ46 265 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 A6NJ64 397 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 TMEM238C9JI98 176 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 LRRN3E7EW58 273 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 H3BMH7 237 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SLC1A7O00341 560 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 KPNA3O00505 521 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SNAI1O95863 264 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ERCC1P07992 297 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 PPIAL4GP0DN37 164 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 HSD11B1P28845 292 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 TGFBR2P37173 567 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 OPRL1P41146 370 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 HTR5AP47898 357 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SRP9P49458 86 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 HLCSP50747 726 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SGSHP51688 502 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 PLA2G16P53816 162 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ABCE1P61221 599 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 IL9RQ01113 521 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MESDQ14696 234 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 GANABQ14697 944 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 FAM189A2Q15884 450 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ZNF876PQ49A33 203 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SBK1Q52WX2 424 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 WSCD1Q658N2 575 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 STEAP1BQ6NZ63 245 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 FAM199XQ6PEV8 388 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 DOK6Q6PKX4 331 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SH2D5Q6ZV89 423 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 Q71RC1 249 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SMIM5Q71RC9 77 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 TGIF2LXQ8IUE1 241 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 STK40Q8N2I9 435 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 EIF4E3Q8N5X7 224 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MFSD9Q8NBP5 474 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 TMEM104Q8NE00 496 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 OR5AU1Q8NGC0 362 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 OR51G2Q8NGK0 314 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 RHEBL1Q8TAI7 183 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 STOML3Q8TAV4 291 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 DEDD2Q8WXF8 326 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 PPWD1Q96BP3 646 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 C2orf48Q96LS8 159 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ZNF2Q9BSG1 426 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 NAT9Q9BTE0 207 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 C20orf24Q9BUV8 137 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 TMED9Q9BVK6 235 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 NMUR2Q9GZQ4 415 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ILKAPQ9H0C8 392 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 OR2AG1Q9H205 316 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 LRRN3Q9H3W5 708 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SDF2L1Q9HCN8 221 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 LYRM4Q9HD34 91 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MED9Q9NWA0 146 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 NLGN3Q9NZ94 848 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 PURGQ9UJV8 347 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 NPTNQ9Y639 398 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MYH15Q9Y2K3 1946 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ZDBF2Q9HCK1 2354 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MYH1P12882 1939 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 A0A1B0GUH1 482 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 hCG_38984A0A1B0GV85 526 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 E7ESA3 106 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms