RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 NHLRC1Q6VVB1 395 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 FRMD7Q6ZUT3 714 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 KRT77Q7Z794 578 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 MOGAT3Q86VF5 341 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 C1orf87Q8N0U7 546 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 KRTCAP2Q8N6L1 136 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 ANKFN1Q8N957 763 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 DTX3Q8N9I9 347 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 OR10AD1Q8NGE0 317 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 FBXO25Q8TCJ0 367 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 NPRL2Q8WTW4 380 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 SLC38A4Q969I6 547 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 COQ8BQ96D53 544 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 KIRREL1Q96J84 757 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 DDOQ99489 341 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 NKX3-1Q99801 234 aaPredicted RBP5.25□□□□□ -1.57
CD44-237ENST00000534082 DUSP26Q9BV47 211 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 SMURF1Q9HCE7 757 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 SIRT7Q9NRC8 400 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 MKS1Q9NXB0 559 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 TMEM216Q9P0N5 145 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 SLAMF8Q9P0V8 285 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 KLHL14Q9P2G3 628 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 SLC17A7Q9P2U7 560 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 GIMAP2Q9UG22 337 aa5.25□□□□□ -1.57
CD44-237ENST00000534082 LSM4Q9Y4Z0 139 aaKnown RBP5.25□□□□□ -1.57
CD44-237ENST00000534082 NUP214P35658 2090 aaPredicted RBP5.24□□□□□ -1.57
CD44-237ENST00000534082 IGKV1D-42A0A075B6H8 117 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 TRAV36DV7A0A075B6V5 113 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 IGHV3-64DA0A0J9YX35 117 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 EXOC1LA0A1B0GW35 172 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 MEIOCA2RUB1 952 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 DBX1A6NMT0 343 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 FBP2O00757 339 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 CHST1O43916 411 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 OR10H3O60404 316 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 PEX14O75381 377 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 CLIC3O95833 236 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 LINC00032P0C843 101 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 ZNF26P17031 533 aaPredicted RBP5.24□□□□□ -1.57
CD44-237ENST00000534082 GSTM3P21266 225 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 KITLGP21583 273 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 SERPINB9P50453 376 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 ARHGDIAP52565 204 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 PLTPP55058 493 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 DGCR2P98153 550 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 PUDPQ08623 228 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 KLRD1Q13241 179 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 SYPL1Q16563 259 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 ZNF181Q2M3W8 571 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 CDONQ4KMG0 1287 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 LIN52Q52LA3 116 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 CRIP3Q6Q6R5 217 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 METAP1DQ6UB28 335 aaPredicted RBP5.24□□□□□ -1.57
CD44-237ENST00000534082 C5orf46Q6UWT4 87 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 ZNF836Q6ZNA1 936 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 LRRC74BQ6ZQY2 392 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 ZCCHC23Q6ZST2 131 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 IGFN1Q86VF2 1251 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 SLC35F6Q8N357 371 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 LRRC18Q8N456 261 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 PNKDQ8N490 385 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 LINC00482Q8N8I6 264 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 ATG16L2Q8NAA4 619 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 BEND2Q8NDZ0 799 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 C19orf18Q8NEA5 215 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 OR4A15Q8NGL6 344 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 AKR7LQ8NHP1 331 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 SLC7A13Q8TCU3 470 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 DDB2Q92466 427 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 TFAP2CQ92754 450 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 TUBGCP3Q96CW5 907 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 SLC41A3Q96GZ6 507 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 TRNT1Q96Q11 434 aaKnown RBP5.24□□□□□ -1.57
CD44-237ENST00000534082 OR5M11Q96RB7 305 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 ZNF607Q96SK3 696 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 SSX3Q99909 188 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 DCTN5Q9BTE1 182 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 POFUT1Q9H488 388 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 TUBB1Q9H4B7 451 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 CCNB1IP1Q9NPC3 277 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 FAM53CQ9NYF3 392 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 ERVK-18Q9QC07 812 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 DNAJB11Q9UBS4 358 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 TMCC3Q9ULS5 477 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 FIS1Q9Y3D6 152 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 KPTNQ9Y664 436 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 HERC1Q15751 4861 aa5.24□□□□□ -1.57
CD44-237ENST00000534082 ELOVL7A1L3X0 281 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 VGLL3A8MV65 326 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 HMGN4O00479 90 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 AZIN1O14977 448 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 LYPLA1O75608 230 aaPredicted RBP5.23□□□□□ -1.57
CD44-237ENST00000534082 LHBP01229 141 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 C1QCP02747 245 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 QDPRP09417 244 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 IRF2P14316 349 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 ZNF32P17041 273 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 PRPS1L1P21108 318 aa5.23□□□□□ -1.57
CD44-237ENST00000534082 CHATP28329 748 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms