RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 KRTAP24-1Q3LI83 254 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 CHRFAM7AQ494W8 412 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 CLEC12AQ5QGZ9 265 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF770Q6IQ21 691 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-215ENST00000533946 CFAP77Q6ZQR2 320 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 USP51Q70EK9 711 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 CYB561A3Q8NBI2 242 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 SDR9C7Q8NEX9 313 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 OR51L1Q8NGJ5 315 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 NSMCE2Q96MF7 247 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 ERMAPQ96PL5 475 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-215ENST00000533946 LRRC37BQ96QE4 947 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 DDOQ99489 341 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 OR52D1Q9H346 318 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 MRGBPQ9NV56 204 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 MRPL22Q9NWU5 206 aaKnown RBP8.18□□□□□ -1.1
SSBP3-215ENST00000533946 FAM53CQ9NYF3 392 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 VSX1Q9NZR4 365 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-215ENST00000533946 ASH2LQ9UBL3 628 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 KLHL21Q9UJP4 597 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 RPS6KA6Q9UK32 745 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 B9D1Q9UPM9 204 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 AP3M1Q9Y2T2 418 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 LYVE1Q9Y5Y7 322 aa8.18□□□□□ -1.1
SSBP3-215ENST00000533946 OR6C6A6NF89 314 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 TVP23AA6NH52 213 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 A6NIZ1 184 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 NDUFS8O00217 210 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 PHF1O43189 567 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-215ENST00000533946 DOK2O60496 412 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF205O95201 554 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 GADD45GO95257 159 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 TXNDC12O95881 172 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 CSF3P09919 207 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 CLUP10909 449 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 SDHAP31040 664 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 HTR5AP47898 357 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 CENPAP49450 140 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 CDH15P55291 814 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 RAP1BP61224 184 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 RAP1AP62834 184 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 PLP2Q04941 152 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 TAF11Q15544 211 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 RFX4Q33E94 735 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 NRN1LQ496H8 165 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 SAMD4BQ5PRF9 694 aaKnown RBP8.17□□□□□ -1.1
SSBP3-215ENST00000533946 LEG1Q6P5S2 330 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 TMEM154Q6P9G4 183 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 SMARCD3Q6STE5 483 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 CXXC5Q7LFL8 322 aaKnown RBP8.17□□□□□ -1.1
SSBP3-215ENST00000533946 CYP4Z1Q86W10 505 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 ZDHHC21Q8IVQ6 265 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 HS3ST5Q8IZT8 346 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 OR5AS1Q8N127 324 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 OR10S1Q8NGN2 331 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 OR4Q3Q8NH05 313 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 FANK1Q8TC84 345 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 RDH5Q92781 318 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 CMBLQ96DG6 245 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 NSL1Q96IY1 281 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 C4orf45Q96LM5 186 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 GPX7Q96SL4 187 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-215ENST00000533946 BEX2Q9BXY8 128 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 ANKRD19PQ9H560 264 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 IL1RAPQ9NPH3 570 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 RPRD1BQ9NQG5 326 aaKnown RBP8.17□□□□□ -1.1
SSBP3-215ENST00000533946 SAMD4AQ9UPU9 718 aaKnown RBP8.17□□□□□ -1.1
SSBP3-215ENST00000533946 GRIP1Q9Y3R0 1128 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 FAM32AQ9Y421 112 aaKnown RBP8.17□□□□□ -1.1
SSBP3-215ENST00000533946 SPEF1Q9Y4P9 236 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 TIMM10BQ9Y5J6 103 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 U3KQV3 271 aa8.17□□□□□ -1.1
SSBP3-215ENST00000533946 OR10H3O60404 316 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 DEAF1O75398 565 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-215ENST00000533946 KHDRBS3O75525 346 aaKnown RBP8.16□□□□□ -1.1
SSBP3-215ENST00000533946 UBOX5O94941 541 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 SOX14O95416 240 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 FABP3P05413 133 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 GYPBP06028 91 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 FAM157CP0CG43 387 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 PAX7P23759 505 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 NOS3P29474 1203 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 GGT2P36268 569 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 GPR6P46095 362 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-215ENST00000533946 GZMKP49863 264 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF81P51508 661 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 SEC61A1P61619 476 aaKnown RBP8.16□□□□□ -1.1
SSBP3-215ENST00000533946 HIST1H3AP68431 136 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 MXRA7P84157 204 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 KRT72Q14CN4 511 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 FAM201AQ5SY85 155 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 HIST2H3PS2Q5TEC6 136 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 FAM166AQ6J272 317 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 DPY19L2P2Q6ZN68 376 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 HIST2H3AQ71DI3 136 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 RRM2BQ7LG56 351 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 GLB1L2Q8IW92 636 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 IQCF1Q8N6M8 205 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 NPEPL1Q8NDH3 523 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms