RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 AQP6Q13520 282 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 FLOT2Q14254 428 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 MAD2L1BPQ15013 274 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-210ENST00000532935 CLEC12AQ5QGZ9 265 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 OTPQ5XKR4 325 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 RASSF6Q6ZTQ3 369 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 ICA1LQ8NDH6 482 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 OR1J1Q8NGS3 322 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 SYNPRQ8TBG9 265 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 C11orf40Q8WZ69 217 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 DGCR6LQ9BY27 220 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 PLA2G12AQ9BZM1 189 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 TPK1Q9H3S4 243 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 MYOZ1Q9NP98 299 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-210ENST00000532935 IL20Q9NYY1 176 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 EIF3KQ9UBQ5 218 aaKnown RBP13.19□□□□□ -0.3
CPSF1-210ENST00000532935 B9D1Q9UPM9 204 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 FN1P02751 2386 aaKnown RBP13.18□□□□□ -0.3
CPSF1-210ENST00000532935 IGLV1-36A0A0B4J1U3 117 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 A0A1W2PPW3 197 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 LOC390937A0A1W2PQ73 354 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 BHLHE40O14503 412 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 DOK2O60496 412 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 GPANK1O95872 356 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 CLPTM1O96005 669 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 GAAP10253 952 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 HOXB6P17509 224 aaKnown RBP13.18□□□□□ -0.3
CPSF1-210ENST00000532935 CENPAP49450 140 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 KLF3P57682 345 aaPredicted RBP13.18□□□□□ -0.3
CPSF1-210ENST00000532935 SELENOVP59797 346 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 KRTAP1-1Q07627 177 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 GK3PQ14409 553 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 KCNMB1Q16558 191 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 CARTPTQ16568 116 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 SLC35F1Q5T1Q4 408 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 SPATA24Q86W54 205 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 ZNF101Q8IZC7 436 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 OR6V1Q8N148 313 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 SDR9C7Q8NEX9 313 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 OR10G2Q8NGC3 310 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 OR8D4Q8NGM9 314 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 MS4A5Q9H3V2 200 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 SRA1Q9HD15 236 aaKnown RBP13.18□□□□□ -0.3
CPSF1-210ENST00000532935 RPRD1BQ9NQG5 326 aaKnown RBP13.18□□□□□ -0.3
CPSF1-210ENST00000532935 ASH2LQ9UBL3 628 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 NDRG4Q9ULP0 352 aaKnown RBP13.18□□□□□ -0.3
CPSF1-210ENST00000532935 POMPQ9Y244 141 aa13.18□□□□□ -0.3
CPSF1-210ENST00000532935 IGLV3-9A0A075B6K5 115 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 TCRBV3S1A0A5B6 114 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 OR6C68A6NDL8 312 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 NDUFS8O00217 210 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 SGCEO43556 437 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 ICMTO60725 284 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 ATP6V1G2O95670 118 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 COX5BP10606 129 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 DAOP14920 347 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 GSTM3P21266 225 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 HTR5AP47898 357 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 ACTR3P61158 418 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.17□□□□□ -0.3
CPSF1-210ENST00000532935 LOXL1Q08397 574 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-210ENST00000532935 NKPD1Q17RQ9 610 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 UNQ6126/PRO20091Q6UXV3 157 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 RFPL4BQ6ZWI9 263 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 VASH1Q7L8A9 365 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-210ENST00000532935 ZBTB46Q86UZ6 589 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 NPEPL1Q8NDH3 523 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 OR52E2Q8NGJ4 325 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 C4orf45Q96LM5 186 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 PIMREGQ9BSJ6 248 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 RACGAP1Q9H0H5 632 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 FN3KQ9H479 309 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 DCLRE1BQ9H816 532 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 TBC1D23Q9NUY8 699 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 PLEK2Q9NYT0 353 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 TAAR3PQ9P1P4 343 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 GPR160Q9UJ42 338 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 POLR1DQ9Y2S0 133 aa13.17□□□□□ -0.3
CPSF1-210ENST00000532935 SONP18583 2426 aaKnown RBP13.16□□□□□ -0.3
CPSF1-210ENST00000532935 GNGT2O14610 69 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 FKBP6O75344 327 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 SOX14O95416 240 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 NAT2P11245 290 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 GLO1Q04760 184 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 DBPQ10586 325 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-210ENST00000532935 SNCBQ16143 134 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 MEP1BQ16820 701 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 ALKBH6Q3KRA9 238 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 SPATA46Q5T0L3 261 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 C1orf146Q5VVC0 180 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-210ENST00000532935 TMEM179BQ7Z7N9 219 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 C1orf174Q8IYL3 243 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 SLC26A10Q8NG04 563 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 ABHD4Q8TB40 342 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 UBASH3BQ8TF42 649 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 GIPC3Q8TF64 312 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 MARS2Q96GW9 593 aaKnown RBP13.16□□□□□ -0.3
CPSF1-210ENST00000532935 NIPSNAP1Q9BPW8 284 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms