RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SCRN3Q0VDG4 424 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 RAB40BQ12829 278 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 MED21Q13503 144 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 KLHL22Q53GT1 634 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 HIST2H3PS2Q5TEC6 136 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 KRT80Q6KB66 452 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 HIST2H3AQ71DI3 136 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 RHOUQ7L0Q8 258 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 SLC16A9Q7RTY1 509 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 BCDIN3DQ7Z5W3 292 aaKnown RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 EGFL6Q8IUX8 553 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 SKA3Q8IX90 412 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 WDR31Q8NA23 367 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 OR51L1Q8NGJ5 315 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 CNIH3Q8TBE1 160 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 S100PBPQ96BU1 408 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 MUCL1Q96DR8 90 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 ZMYND19Q96E35 227 aaPredicted RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 MYCBPQ99417 103 aaPredicted RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 CNN2Q99439 309 aaKnown RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 ZNF416Q9BWM5 594 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 WDR76Q9H967 626 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 B3GNT2Q9NY97 397 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 ZNF224Q9NZL3 707 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 CNOT2Q9NZN8 540 aaKnown RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 CRNNQ9UBG3 495 aaPredicted RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 EXOGQ9Y2C4 368 aaKnown RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 TIMM10BQ9Y5J6 103 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 SLC25A15Q9Y619 301 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 TMEM14AQ9Y6G1 99 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 DIDO1Q9BTC0 2240 aaKnown RBP10.91□□□□□ -0.66
COPB1-208ENST00000532088 FAM171A2A8MVW0 826 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 PHYHO14832 338 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 MPZL1O95297 269 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 PTHP01270 115 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 SBK2P0C263 348 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 OR2T7P0C7T2 308 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 COX5BP10606 129 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 CBR1P16152 277 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 ACTC1P68032 377 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 ACTA1P68133 377 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 ADAM8P78325 824 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 ZNF91Q05481 1191 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 GSG1Q2KHT4 349 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 HIKESHIQ53FT3 197 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 C6orf141Q5SZD1 244 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 LAIR2Q6ISS4 152 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 SLC18B1Q6NT16 456 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 TMEM53Q6P2H8 277 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 ERI1Q8IV48 349 aaKnown RBP10.91□□□□□ -0.66
COPB1-208ENST00000532088 GJC3Q8NFK1 279 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 OR2T27Q8NH04 317 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 OTOSQ8NHW6 89 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 CNBD2Q96M20 576 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 DACH2Q96NX9 599 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 SH3GL3Q99963 347 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 CDADC1Q9BWV3 514 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 JAM3Q9BX67 310 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 YTHDF1Q9BYJ9 559 aaKnown RBP10.91□□□□□ -0.66
COPB1-208ENST00000532088 C1orf198Q9H425 327 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 ADGRL4Q9HBW9 690 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 CCNB1IP1Q9NPC3 277 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 INPP5EQ9NRR6 644 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 PCNX1Q96RV3 2341 aa10.91□□□□□ -0.66
COPB1-208ENST00000532088 EFCAB10A6NFE3 127 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 TVP23AA6NH52 213 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 J3QRE1 110 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 ZNF593O00488 134 aaPredicted RBP10.9□□□□□ -0.66
COPB1-208ENST00000532088 SEC14L2O76054 403 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 GOSR1O95249 250 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 IGKV3-15P01624 115 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 IGLV1-44P01699 117 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 PPA1Q15181 289 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 TSC22D1Q15714 1073 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 TAB1Q15750 504 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 RBM48Q5RL73 367 aaKnown RBP10.9□□□□□ -0.66
COPB1-208ENST00000532088 UGT2A3Q6UWM9 527 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 CDC20BQ86Y33 519 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 LRRC18Q8N456 261 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 OR6N2Q8NGY6 317 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 OR2AJ1Q8NGZ0 328 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 IPCEF1Q8WWN9 437 aaPredicted RBP10.9□□□□□ -0.66
COPB1-208ENST00000532088 ASB17Q8WXJ9 295 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 FBXO17Q96EF6 278 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 RNFT2Q96EX2 444 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 ZNF75AQ96N20 296 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 HDHD2Q9H0R4 259 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 FGF20Q9NP95 211 aaPredicted RBP10.9□□□□□ -0.66
COPB1-208ENST00000532088 EMC7Q9NPA0 242 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 NGBQ9NPG2 151 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 FKBP14Q9NWM8 211 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 SCN3BQ9NY72 215 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 ASH2LQ9UBL3 628 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 POLR1DQ9Y2S0 133 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 LHFPL6Q9Y693 200 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 HCFC1P51610 2035 aa10.9□□□□□ -0.66
COPB1-208ENST00000532088 UBR5O95071 2799 aaPredicted RBP10.9□□□□□ -0.66
COPB1-208ENST00000532088 TUBAL3A6NHL2 446 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 SLC1A7O00341 560 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms