RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	GFI1	Q99684	422 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	EFCAB11	Q9BUY7	163 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	GON7	Q9BXV9	100 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	MRPL13	Q9BYD1	178 aa	Known RBP	4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	IQCG	Q9H095	443 aa	Known RBP	4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	SLITRK2	Q9H156	845 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	DCLRE1B	Q9H816	532 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	FOLH1B	Q9HBA9	442 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	ESM1	Q9NQ30	184 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	LZTFL1	Q9NQ48	299 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	ACOXL	Q9NUZ1	547 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	LYAR	Q9NX58	379 aa	Known RBP	4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	RNF14	Q9UBS8	474 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	CFL2	Q9Y281	166 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	OARD1	Q9Y530	152 aa		4.85	□□□□□ -1.63
PUM1-222	ENST00000531867	C17orf51	A8MQB3	221 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867		F8VVB4	439 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867		F8VWA3	439 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	PLPP1	O14494	284 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	TAPBP	O15533	448 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	SPINT2	O43291	252 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	SNN	O75324	88 aa	Predicted RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	EED	O75530	441 aa	Known RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	PSG1	P11464	419 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	MLN	P12872	115 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	SERPINB1	P30740	379 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	RBMX	P38159	391 aa	Known RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	MAGEA3	P43357	314 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	EMD	P50402	254 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	FABP6	P51161	128 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	PGGT1B	P53609	377 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	PSPH	P78330	225 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	NNAT	Q16517	81 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	RAET1L	Q5VY80	246 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	CARD17	Q5XLA6	110 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	COLCA1	Q6ZS62	124 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867		Q6ZT83	130 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	NUFIP2	Q7Z417	695 aa	Known RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	GALNT10	Q86SR1	603 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	SVOPL	Q8N434	492 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	OR4K17	Q8NGC6	315 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	RNF128	Q8TEB7	428 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	TMBIM1	Q969X1	311 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	ERGIC1	Q969X5	290 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	CMTM7	Q96FZ5	175 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	FAM210A	Q96ND0	272 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	DSN1	Q9H410	356 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	DDX31	Q9H8H2	851 aa	Known RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	GSN-AS1	Q9NRJ2	163 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	FAM120C	Q9NX05	1096 aa	Known RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	RDH8	Q9NYR8	311 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	MAT2B	Q9NZL9	334 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	CHRNA9	Q9UGM1	479 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	MCTS1	Q9ULC4	181 aa	Known RBP	4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	N6AMT1	Q9Y5N5	214 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	PTGDR2	Q9Y5Y4	395 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	FKBP7	Q9Y680	259 aa		4.84	□□□□□ -1.63
PUM1-222	ENST00000531867	IGLV3-32	A0A0A0MS00	114 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	OR5H1	A6NKK0	313 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	MIF4GD	A9UHW6	222 aa	Known RBP	4.83	□□□□□ -1.64
PUM1-222	ENST00000531867		B4DSR2	109 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	MS4A18	H0YCH9	400 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867		H3BNX3	289 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	SAP18	O00422	153 aa	Known RBP	4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	HSPB6	O14558	160 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	FADS1	O60427	444 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	REM1	O75628	298 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	TOMM40	O96008	361 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	KRT14	P02533	472 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	ATP1B1	P05026	303 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	CT45A8	P0DMV1	189 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	CT45A9	P0DMV2	189 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	DBT	P11182	482 aa	Known RBP	4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	CPM	P14384	443 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF17	P17021	662 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	COX5A	P20674	150 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	NT5E	P21589	574 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	PAX7	P23759	505 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	ENTPD1	P49961	510 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	UBA52	P62987	128 aa	Known RBP	4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	BASP1	P80723	227 aa	Known RBP	4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	CT45A2	Q5DJT8	189 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	PAGE2B	Q5JRK9	111 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	CDKL4	Q5MAI5	379 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	SPANXN2	Q5MJ10	180 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	OR52E8	Q6IFG1	317 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	KCTD18	Q6PI47	426 aa	Predicted RBP	4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	SPATA24	Q86W54	205 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	COMMD1	Q8N668	190 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	SYT14	Q8NB59	555 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	OR5M1	Q8NGP8	315 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	GIPC3	Q8TF64	312 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	C1orf54	Q8WWF1	131 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	TAAR8	Q969N4	342 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	ITFG2	Q969R8	447 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	MCUR1	Q96AQ8	359 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms