RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PTP4A1Q93096 173 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 SPDL1Q96EA4 605 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 SGTBQ96EQ0 304 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 NEIL1Q96FI4 390 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-206ENST00000531430 MAGEB18Q96M61 343 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 OR8B2Q96RD0 313 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 CITED1Q99966 193 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 TMEM109Q9BVC6 243 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 IKZF5Q9H5V7 419 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 TMEM38AQ9H6F2 299 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 EVA1AQ9H8M9 152 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 SSU72Q9NP77 194 aaKnown RBP7.73□□□□□ -1.17
NEDD8-206ENST00000531430 KIF17Q9P2E2 1029 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 CLN8Q9UBY8 286 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 IL19Q9UHD0 177 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 STARD10Q9Y365 291 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 UGT2A1Q9Y4X1 527 aa7.73□□□□□ -1.17
NEDD8-206ENST00000531430 DOCK11Q5JSL3 2073 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 PRKDCP78527 4128 aaKnown RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 SLC22A31A6NKX4 558 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 C12orf71A8MTZ7 269 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 A8MXK9 166 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 F5H0A9 414 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 SHOX2O60902 331 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 ERLIN1O75477 346 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 OR7A10O76100 309 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 LYPD3O95274 346 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 TSPAN15O95858 294 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 CST2P09228 141 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 IRF2P14316 349 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 HTR5AP47898 357 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 PITPNBP48739 271 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 WDR4P57081 412 aaKnown RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 TAS2R41P59536 307 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 PDCD1Q15116 288 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 AGKQ53H12 422 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 FBLN7Q53RD9 439 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 C10orf128Q5T292 105 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 ARMC4Q5T2S8 1044 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 FAM27BQ5VT28 67 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 SLC25A47Q6Q0C1 308 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 LYPD2Q6UXB3 125 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 C9orf139Q6ZV77 190 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 VASH1Q7L8A9 365 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 NLRC3Q7RTR2 1065 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 MAVSQ7Z434 540 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 IGFN1Q86VF2 1251 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 MOGAT3Q86VF5 341 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 NKAIN4Q8IVV8 208 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 PDZD9Q8IXQ8 264 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 BOLLQ8N9W6 283 aaKnown RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 C11orf65Q8NCR3 313 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 C19orf18Q8NEA5 215 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 GPR32P1Q8NGA4 272 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 OR10AD1Q8NGE0 317 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 AENQ8WTP8 325 aaKnown RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 NABP1Q96AH0 204 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 MPP4Q96JB8 637 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 MAELQ96JY0 434 aaKnown RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 FAM71F1Q96KD3 344 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 SIGLEC11Q96RL6 698 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 TMEM246Q9BRR3 403 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 RERGLQ9H628 205 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 GCM1Q9NP62 436 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 EMC7Q9NPA0 242 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 NOX4Q9NPH5 578 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 MEPEQ9NQ76 525 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 PTTG3PQ9NZH4 202 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 STX18Q9P2W9 335 aaKnown RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 ASH2LQ9UBL3 628 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 NDRG4Q9ULP0 352 aaKnown RBP7.72□□□□□ -1.17
NEDD8-206ENST00000531430 CORO2BQ9UQ03 480 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 ZNF281Q9Y2X9 895 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 SH3GLB1Q9Y371 365 aa7.72□□□□□ -1.17
NEDD8-206ENST00000531430 LRRC30A6NM36 301 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 CENPBD1B2RD01 187 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 H0YL77 283 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 POLR3GO15318 223 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-206ENST00000531430 SNNO75324 88 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-206ENST00000531430 NDUFA7O95182 113 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 MT-ND1P03886 318 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 MELTFP08582 738 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 PPIAL4GP0DN37 164 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 NR2C1P13056 603 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 GPX2P18283 190 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 SRP9P49458 86 aaKnown RBP7.71□□□□□ -1.18
NEDD8-206ENST00000531430 ERFP50548 548 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 MMP16P51512 607 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 CTXN1P60606 82 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 ALG10Q5BKT4 473 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 LRIF1Q5T3J3 769 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 OTPQ5XKR4 325 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 FAM205BPQ63HN1 556 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 OR2T2Q6IF00 324 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 BLOC1S3Q6QNY0 202 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 FUNDC1Q8IVP5 155 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 FITM2Q8N6M3 262 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 SCCPDHQ8NBX0 429 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 NPEPL1Q8NDH3 523 aa7.71□□□□□ -1.18
NEDD8-206ENST00000531430 LINC01006Q8NI28 216 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms