RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ALOX5APP20292 161 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 CD79BP40259 229 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 UBE2NP61088 152 aaKnown RBP16.66■□□□□ 0.26
SMPD1-205ENST00000531303 AQP6Q13520 282 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 PCK2Q16822 640 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 NRN1LQ496H8 165 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 ALKBH2Q6NS38 261 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 ZNF773Q6PK81 442 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 PRSS48Q7RTY5 328 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 ZNF454Q8N9F8 522 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 MAP6Q96JE9 813 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 ALG8Q9BVK2 526 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 ELOVL5Q9NYP7 299 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 TMEM14AQ9Y6G1 99 aa16.66■□□□□ 0.26
SMPD1-205ENST00000531303 RELNP78509 3460 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 SPTBN1Q01082 2364 aaKnown RBP16.65■□□□□ 0.26
SMPD1-205ENST00000531303 ZNF503-AS2A6NEH8 195 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 LIMS3P0CW19 117 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 LIMS4P0CW20 117 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 SLC36A2Q495M3 483 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 OR7E24Q6IFN5 339 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 ZNF322Q6U7Q0 402 aaPredicted RBP16.65■□□□□ 0.26
SMPD1-205ENST00000531303 OR52N5Q8NH56 324 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 AKR7LQ8NHP1 331 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 SNX33Q8WV41 574 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 S100PBPQ96BU1 408 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 MNTQ99583 582 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 C1orf198Q9H425 327 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 ZNF224Q9NZL3 707 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 IKZF2Q9UKS7 526 aa16.65■□□□□ 0.26
SMPD1-205ENST00000531303 TRIM64A6NGJ6 449 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 HOXC12P31275 282 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 ASCL1P50553 236 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 PCBD1P61457 104 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 GALEQ14376 348 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 TP53I3Q53FA7 332 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 OR2G6Q5TZ20 316 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 ZNF774Q6NX45 483 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 LRRN1Q6UXK5 716 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 SPARTQ8N0X7 666 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 C1orf162Q8NEQ5 155 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-205ENST00000531303 GJC3Q8NFK1 279 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 ST7LQ8TDW4 575 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 SLAMF6Q96DU3 332 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 SIGLEC11Q96RL6 698 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 C1QTNF6Q9BXI9 259 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 HDHD5Q9BXW7 423 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 ACTR6Q9GZN1 396 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 NOX3Q9HBY0 568 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 SLC17A5Q9NRA2 495 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 INPP5EQ9NRR6 644 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 SLCO1C1Q9NYB5 712 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 ERGIC3Q9Y282 383 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 TIMM10BQ9Y5J6 103 aa16.64■□□□□ 0.25
SMPD1-205ENST00000531303 A0A087WXM4 84 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 C16orf97H3BN30 126 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 J3QLW9 94 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 MYL12BO14950 172 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 AGFG2O95081 481 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 ZNF19P17023 458 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 PSMB1P20618 241 aaKnown RBP16.63■□□□□ 0.25
SMPD1-205ENST00000531303 PSG4Q00888 419 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 CCDC92Q53HC0 331 aaPredicted RBP16.63■□□□□ 0.25
SMPD1-205ENST00000531303 TMEM53Q6P2H8 277 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 KRT77Q7Z794 578 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 MDP1Q86V88 176 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 KLHL36Q8N4N3 616 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 WDR31Q8NA23 367 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 OR10S1Q8NGN2 331 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 ITLN2Q8WWU7 325 aaPredicted RBP16.63■□□□□ 0.25
SMPD1-205ENST00000531303 ASB17Q8WXJ9 295 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 NANOS1Q8WY41 292 aaKnown RBP16.63■□□□□ 0.25
SMPD1-205ENST00000531303 ZNF649Q9BS31 505 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 JAM3Q9BX67 310 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 CDCA4Q9BXL8 241 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 OR2H1Q9GZK4 316 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 ISG20L2Q9H9L3 353 aaKnown RBP16.63■□□□□ 0.25
SMPD1-205ENST00000531303 KCNJ16Q9NPI9 418 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 PLEK2Q9NYT0 353 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 GNG8Q9UK08 70 aa16.63■□□□□ 0.25
SMPD1-205ENST00000531303 OR5H1A6NKK0 313 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 PHYHO14832 338 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 SGCEO43556 437 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 UBL3O95164 117 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 PTHP01270 115 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 MMP7P09237 267 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-205ENST00000531303 SMIM18P0DKX4 95 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 UGT2B10P36537 528 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 OR12D2P58182 307 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 RAB1AP62820 205 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 SCRN3Q0VDG4 424 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 IRF3Q14653 427 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 TAF13Q15543 124 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 PABPC1L2AQ5JQF8 200 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 PLEKHG7Q6ZR37 379 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 STEAP2Q8NFT2 490 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 SPRYD4Q8WW59 207 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-205ENST00000531303 GATAD2BQ8WXI9 593 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 WNT5BQ9H1J7 359 aa16.62■□□□□ 0.25
SMPD1-205ENST00000531303 DOK2O60496 412 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms