RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 SAMD8Q96LT4 415 aa16.08■□□□□ 0.16
PCNX3-203ENST00000530174 TSSK2Q96PF2 358 aa16.08■□□□□ 0.16
PCNX3-203ENST00000530174 OR2J1Q9GZK6 312 aa16.08■□□□□ 0.16
PCNX3-203ENST00000530174 MUC13Q9H3R2 512 aa16.08■□□□□ 0.16
PCNX3-203ENST00000530174 CHODLQ9H9P2 273 aa16.08■□□□□ 0.16
PCNX3-203ENST00000530174 NDRG4Q9ULP0 352 aaKnown RBP16.08■□□□□ 0.16
PCNX3-203ENST00000530174 DCTN6O00399 190 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 ARPC3O15145 178 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 SGCEO43556 437 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 KRT36O76013 467 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 NGFP01138 241 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 COX5BP10606 129 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 ACHEP22303 614 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 GCH1P30793 250 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 IL2RGP31785 369 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 HTR5AP47898 357 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 HMGA2P52926 109 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 PPP1CBP62140 327 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 MS4A2Q01362 244 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 TSPAN31Q12999 210 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 AQP6Q13520 282 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 TRIM25Q14258 630 aaKnown RBP16.07■□□□□ 0.16
PCNX3-203ENST00000530174 MOGQ16653 247 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 CHRFAM7AQ494W8 412 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 TMEM255AQ5JRV8 349 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 ZNF620Q6ZNG0 422 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 VASH1Q7L8A9 365 aaPredicted RBP16.07■□□□□ 0.16
PCNX3-203ENST00000530174 JAZF1Q86VZ6 243 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 OR9Q2Q8NGE9 314 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 KLF14Q8TD94 323 aaPredicted RBP16.07■□□□□ 0.16
PCNX3-203ENST00000530174 SNX18Q96RF0 628 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 SOX7Q9BT81 388 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 IFT27Q9BW83 186 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 MAGIXQ9H6Y5 334 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 ELOVL3Q9HB03 270 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 TMEM160Q9NX00 188 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 FAM53CQ9NYF3 392 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 ASH2LQ9UBL3 628 aa16.07■□□□□ 0.16
PCNX3-203ENST00000530174 PRPF19Q9UMS4 504 aaKnown RBP16.07■□□□□ 0.16
PCNX3-203ENST00000530174 LOC100289279A0A1B0GTE1 492 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 TNFRSF11BO00300 401 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 LMX1BO60663 402 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 GPANK1O95872 356 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 MT-ND5P03915 603 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 HIST1H1CP16403 213 aaKnown RBP16.06■□□□□ 0.16
PCNX3-203ENST00000530174 CRABP1P29762 137 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 LSM6P62312 80 aaKnown RBP16.06■□□□□ 0.16
PCNX3-203ENST00000530174 CCL8P80075 99 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 MRPS11P82912 194 aaKnown RBP16.06■□□□□ 0.16
PCNX3-203ENST00000530174 DBPQ10586 325 aaPredicted RBP16.06■□□□□ 0.16
PCNX3-203ENST00000530174 PCGF3Q3KNV8 242 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 MBNL2Q5VZF2 373 aaKnown RBP16.06■□□□□ 0.16
PCNX3-203ENST00000530174 FAM166AQ6J272 317 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 LEG1Q6P5S2 330 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 DNM1P34Q6PK57 102 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 C1orf174Q8IYL3 243 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 OR4C15Q8NGM1 316 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 OR4K13Q8NH42 304 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 NMNAT3Q96T66 252 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 BTBD10Q9BSF8 475 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 ZNF275Q9NSD4 429 aaPredicted RBP16.06■□□□□ 0.16
PCNX3-203ENST00000530174 NKIRAS2Q9NYR9 191 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 PLEK2Q9NYT0 353 aa16.06■□□□□ 0.16
PCNX3-203ENST00000530174 IGLV1-36A0A0B4J1U3 117 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 RP2O75695 350 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 ABHD16AO95870 558 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 RENP00797 406 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 GAAP10253 952 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 NOS3P29474 1203 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 GPR6P46095 362 aaPredicted RBP16.05■□□□□ 0.16
PCNX3-203ENST00000530174 CENPAP49450 140 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 ARHGDIAP52565 204 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 KCNMB1Q16558 191 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 MEP1BQ16820 701 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 ARL9Q6T311 187 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.05■□□□□ 0.16
PCNX3-203ENST00000530174 OR6V1Q8N148 313 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 HPS1Q92902 700 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 CCDC124Q96CT7 223 aaKnown RBP16.05■□□□□ 0.16
PCNX3-203ENST00000530174 CLPTM1LQ96KA5 538 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 TRIM15Q9C019 465 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 EGLN3Q9H6Z9 239 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 SRA1Q9HD15 236 aaKnown RBP16.05■□□□□ 0.16
PCNX3-203ENST00000530174 TAS2R1Q9NYW7 299 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 CDC42EP3Q9UKI2 254 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 KCNS2Q9ULS6 477 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 B9D1Q9UPM9 204 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 POLR1DQ9Y2S0 133 aa16.05■□□□□ 0.16
PCNX3-203ENST00000530174 H3BSA7 217 aa16.04■□□□□ 0.16
PCNX3-203ENST00000530174 IDH3BO43837 385 aa16.04■□□□□ 0.16
PCNX3-203ENST00000530174 CDC14BO60729 498 aa16.04■□□□□ 0.16
PCNX3-203ENST00000530174 IGFBP5P24593 272 aa16.04■□□□□ 0.16
PCNX3-203ENST00000530174 ZNF81P51508 661 aa16.04■□□□□ 0.16
PCNX3-203ENST00000530174 MMP15P51511 669 aa16.04■□□□□ 0.16
PCNX3-203ENST00000530174 PPP1R8Q12972 351 aaKnown RBP16.04■□□□□ 0.16
PCNX3-203ENST00000530174 CCNIQ14094 377 aa16.04■□□□□ 0.16
PCNX3-203ENST00000530174 TSTQ16762 297 aaKnown RBP16.04■□□□□ 0.16
PCNX3-203ENST00000530174 FAM98BQ52LJ0 330 aaKnown RBP16.04■□□□□ 0.16
PCNX3-203ENST00000530174 CCDC92Q53HC0 331 aaPredicted RBP16.04■□□□□ 0.16
PCNX3-203ENST00000530174 CLEC12AQ5QGZ9 265 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms