RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 A0A0G2JNG1 304 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 SERINC4A6NH21 518 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 KIR2DS3K7RE56 304 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 PGAM2P15259 253 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 CENPAP49450 140 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 ALKBH1Q13686 389 aaKnown RBP12.8□□□□□ -0.36
USP48-213ENST00000529637 KIR2DS5Q14953 304 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 OR4S1Q8NGB4 309 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 RLN3Q8WXF3 142 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 FAM131CQ96AQ9 280 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 VSTM2LQ96N03 204 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 G6PC3Q9BUM1 346 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 PNO1Q9NRX1 252 aaKnown RBP12.8□□□□□ -0.36
USP48-213ENST00000529637 TVP23AA6NH52 213 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 FGF16O43320 207 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 SNAPINO95295 136 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 ABOP16442 354 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 MAP3K8P41279 467 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 GFOD2Q3B7J2 385 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 C3orf33Q6P1S2 294 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 ZNF704Q6ZNC4 412 aaPredicted RBP12.8□□□□□ -0.36
USP48-213ENST00000529637 SLC29A4Q7RTT9 530 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 ZNF227Q86WZ6 799 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 ZSCAN1Q8NBB4 408 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 OR1J4Q8NGS1 313 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 NUBPLQ8TB37 319 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 C15orf40Q8WUR7 153 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 ATG5Q9H1Y0 275 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 SEMA6CQ9H3T2 930 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 EEF1E1-BLOC1S5C9J1V9 151 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 DCTN6O00399 190 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 SSX5O60225 188 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 GPANK1O95872 356 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 SLC25A4P12235 298 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 S1PR1P21453 382 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 PPT1P50897 306 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 TMPPEQ6ZT21 453 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 CD163Q86VB7 1156 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 BCORP1Q8N888 145 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 OR13C8Q8NGS7 320 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ZNF563Q8TA94 476 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 GPBAR1Q8TDU6 330 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 C3orf49Q96BT1 292 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 SEH1LQ96EE3 360 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ALG12Q9BV10 488 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 OR10A5Q9H207 317 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 GTF2A1LQ9UNN4 478 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 RP1P56715 2156 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 A0A0B4J2A0 478 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 PRAMEF26H0Y7S4 382 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 NUDT14O95848 222 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 CDKN2AP42771 156 aaKnown RBP12.79□□□□□ -0.36
USP48-213ENST00000529637 SKP1P63208 163 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 PRR22Q8IZ63 422 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 GPX8Q8TED1 209 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 PPP1R14AQ96A00 147 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ZBTB8AQ96BR9 441 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ADAD1Q96M93 576 aaKnown RBP12.79□□□□□ -0.36
USP48-213ENST00000529637 GAL3ST4Q96RP7 486 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ZNF251Q9BRH9 671 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 OR8D2Q9GZM6 311 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 SHPKQ9UHJ6 478 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 MSRAQ9UJ68 235 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 CD207Q9UJ71 328 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 TRBV5-5A0A0J9YX44 114 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ZNF735P0CB33 412 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 CD79AP11912 226 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ZNF44P15621 663 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 DRD1P21728 446 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 CTXN1P60606 82 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ECH1Q13011 328 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 GAS6Q14393 721 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ZNF627Q7L945 461 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 FAM220AQ7Z4H9 259 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 PAQR4Q8N4S7 273 aaPredicted RBP12.79□□□□□ -0.36
USP48-213ENST00000529637 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 CCDC107Q8WV48 283 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 MRPL38Q96DV4 380 aaKnown RBP12.79□□□□□ -0.36
USP48-213ENST00000529637 SLC6A7Q99884 636 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 ZNF426Q9BUY5 554 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 MRI1Q9BV20 369 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 RXFP3Q9NSD7 469 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 GHRLQ9UBU3 117 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 VSIG4Q9Y279 399 aa12.79□□□□□ -0.36
USP48-213ENST00000529637 NOSIPQ9Y314 301 aaKnown RBP12.79□□□□□ -0.36
USP48-213ENST00000529637 C5orf52A6NGY3 159 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 DCNP07585 359 aaKnown RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 MST1LQ2TV78 715 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 EXOSC6Q5RKV6 272 aaKnown RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 C5orf46Q6UWT4 87 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 DPY19L2P2Q6ZN68 376 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 NAA40Q86UY6 237 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 MISPQ8IVT2 679 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 PMM1Q92871 262 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 TCEAL3Q969E4 200 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 PIK3IP1Q96FE7 263 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 ZC3H10Q96K80 434 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms