RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 IGLV1-36A0A0B4J1U3 117 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 A0A1W2PNV4 684 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 ACOD1A6NK06 481 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 LIPT2A6NK58 231 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 OR4C45A6NMZ5 311 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 PSMD9O00233 223 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 DCTN6O00399 190 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 EEF1E1O43324 174 aaKnown RBP10.5□□□□□ -0.73
USF1-208ENST00000528768 AQP8O94778 261 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 GSTT2BP0CG30 244 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 ICAM2P13598 275 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 SNRPBP14678 240 aaKnown RBP10.5□□□□□ -0.73
USF1-208ENST00000528768 CAPZA1P52907 286 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 ART1P52961 327 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 CLDN20P56880 219 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 NANOS3P60323 173 aaKnown RBP10.5□□□□□ -0.73
USF1-208ENST00000528768 GPR85P60893 370 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 HSF1Q00613 529 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 EIF2B1Q14232 305 aaKnown RBP10.5□□□□□ -0.73
USF1-208ENST00000528768 CARTPTQ16568 116 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 MEP1BQ16820 701 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 ZFP69Q49AA0 526 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 TEX30Q5JUR7 227 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 SLC22A10Q63ZE4 541 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 OR5M10Q6IEU7 315 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 TMEM81Q6P7N7 255 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 LYPD4Q6UWN0 246 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 IL20RBQ6UXL0 311 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.5□□□□□ -0.73
USF1-208ENST00000528768 UEVLDQ8IX04 471 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 UBASH3BQ8TF42 649 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 TSEN15Q8WW01 171 aaKnown RBP10.5□□□□□ -0.73
USF1-208ENST00000528768 C8orf44Q96CB5 159 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 C4orf45Q96LM5 186 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 FAM210AQ96ND0 272 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 RASL10BQ96S79 203 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 KLHDC3Q9BQ90 382 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 FANCFQ9NPI8 374 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 B3GAT2Q9NPZ5 323 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 SLCO1C1Q9NYB5 712 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 FRRS1LQ9P0K9 344 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 KLHL9Q9P2J3 617 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 VDAC3Q9Y277 283 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 RPH3AQ9Y2J0 694 aaPredicted RBP10.5□□□□□ -0.73
USF1-208ENST00000528768 KLHDC2Q9Y2U9 406 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 HDGFL3Q9Y3E1 203 aa10.5□□□□□ -0.73
USF1-208ENST00000528768 MEGF11A6BM72 1044 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 NAP1L6A6NFF2 107 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 TMEM200CA6NKL6 621 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 INMT-MINDY4F8WBC2 141 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 MS4A18H0YCH9 400 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 SSX4O60224 188 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 PAHP00439 452 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 HRGP04196 525 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 ITGA3P26006 1051 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 POU3F1Q03052 451 aaPredicted RBP10.49□□□□□ -0.73
USF1-208ENST00000528768 DBPQ10586 325 aaPredicted RBP10.49□□□□□ -0.73
USF1-208ENST00000528768 MADCAM1Q13477 382 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 DYRK1AQ13627 763 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 PCOLCEQ15113 449 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 PLPPR5Q32ZL2 321 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 MS4A18Q3C1V0 323 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 TBRG1Q3YBR2 411 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 KLHL24Q6TFL4 600 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 LYPD8Q6UX82 237 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 STAC2Q6ZMT1 411 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 ZNF704Q6ZNC4 412 aaPredicted RBP10.49□□□□□ -0.73
USF1-208ENST00000528768 C16orf47Q6ZP98 133 aaPredicted RBP10.49□□□□□ -0.73
USF1-208ENST00000528768 OR2M3Q8NG83 312 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 OR10G3Q8NGC4 313 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 OR52N5Q8NH56 324 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 LGALS14Q8TCE9 139 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 MAP6Q96JE9 813 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 ZFP3Q96NJ6 502 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 MARVELD1Q9BSK0 173 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 OR2B2Q9GZK3 357 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 ACTR6Q9GZN1 396 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 ABCG5Q9H222 651 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 GALNT9Q9HCQ5 603 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 ZNF275Q9NSD4 429 aaPredicted RBP10.49□□□□□ -0.73
USF1-208ENST00000528768 ING3Q9NXR8 418 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 NLKQ9UBE8 527 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 KCNG2Q9UJ96 466 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 DHDHQ9UQ10 334 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 MRPS7Q9Y2R9 242 aaKnown RBP10.49□□□□□ -0.73
USF1-208ENST00000528768 NUBP2Q9Y5Y2 271 aa10.49□□□□□ -0.73
USF1-208ENST00000528768 TRBV5-7A0A0A0MS05 114 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 IGHV1-45A0A0A0MS14 117 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 NSG1A0A0A6YYJ2 146 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 C2orf72A6NCS6 295 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 ADAM10O14672 748 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 PIN1P1O15428 100 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 CEACAM4O75871 244 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 IFNGR1P15260 489 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 CTLA4P16410 223 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 SOX2P48431 317 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 SSR4P51571 173 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 SLC35A1P78382 337 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 GPR176Q14439 515 aa10.48□□□□□ -0.73
USF1-208ENST00000528768 MELKQ14680 651 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms