RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 TEX12Q9BXU0 123 aa11.53□□□□□ -0.56
CAPN1-209ENST00000527469 MRPL37Q9BZE1 423 aaKnown RBP11.53□□□□□ -0.56
CAPN1-209ENST00000527469 PLA2G12AQ9BZM1 189 aa11.53□□□□□ -0.56
CAPN1-209ENST00000527469 RACGAP1Q9H0H5 632 aa11.53□□□□□ -0.56
CAPN1-209ENST00000527469 FN3KQ9H479 309 aa11.53□□□□□ -0.56
CAPN1-209ENST00000527469 ELOVL3Q9HB03 270 aa11.53□□□□□ -0.56
CAPN1-209ENST00000527469 ARMC1Q9NVT9 282 aa11.53□□□□□ -0.56
CAPN1-209ENST00000527469 PLEK2Q9NYT0 353 aa11.53□□□□□ -0.56
CAPN1-209ENST00000527469 KLHL21Q9UJP4 597 aa11.53□□□□□ -0.56
CAPN1-209ENST00000527469 B9D1Q9UPM9 204 aa11.53□□□□□ -0.56
CAPN1-209ENST00000527469 RNF223E7ERA6 249 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 EBAG9O00559 213 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 BHLHE40O14503 412 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 TIPRLO75663 272 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 MPZL1O95297 269 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 ABHD16AO95870 558 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 SCG5P05408 212 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 IGFBP1P08833 259 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-209ENST00000527469 ZNF823P16415 610 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 ZNF3P17036 446 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 GCH1P30793 250 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 MOGQ16653 247 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 OTPQ5XKR4 325 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 CD300LDQ6UXZ3 194 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 C1orf174Q8IYL3 243 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 OR6V1Q8N148 313 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 ZNF525Q8N782 197 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 CYB561A3Q8NBI2 242 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 PAPD5Q8NDF8 572 aaKnown RBP11.52□□□□□ -0.57
CAPN1-209ENST00000527469 GJC3Q8NFK1 279 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 OR8D4Q8NGM9 314 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 OR2AJ1Q8NGZ0 328 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 ABHD4Q8TB40 342 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 OTULINQ96BN8 352 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 COX4I2Q96KJ9 171 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 POM121L2Q96KW2 1035 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 SORCS2Q96PQ0 1159 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 DOK1Q99704 481 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 NIPSNAP1Q9BPW8 284 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 MS4A5Q9H3V2 200 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 DLL4Q9NR61 685 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 REV1Q9UBZ9 1251 aa11.52□□□□□ -0.57
CAPN1-209ENST00000527469 LOC100509620A0A075B734 347 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 IGLV1-36A0A0B4J1U3 117 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 OR6C68A6NDL8 312 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 DCTN6O00399 190 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 LY6HO94772 140 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 GPANK1O95872 356 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 COX5BP10606 129 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 FCGR1AP12314 374 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 ANXA8P13928 327 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 ALDH3B1P43353 468 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 PDLIM4P50479 330 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 TEKQ02763 1124 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 MEP1BQ16820 701 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 ZNF718Q3SXZ3 478 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 SPATA46Q5T0L3 261 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 TMEM154Q6P9G4 183 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 CLEC9AQ6UXN8 241 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 LNX2Q8N448 690 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 OR1F12Q8NHA8 337 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 NEU4Q8WWR8 484 aaPredicted RBP11.51□□□□□ -0.57
CAPN1-209ENST00000527469 C4orf45Q96LM5 186 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 REG4Q9BYZ8 158 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 TPK1Q9H3S4 243 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 MYOZ1Q9NP98 299 aaPredicted RBP11.51□□□□□ -0.57
CAPN1-209ENST00000527469 SLCO1C1Q9NYB5 712 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 TAAR3PQ9P1P4 343 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 GRIP1Q9Y3R0 1128 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 AP4S1Q9Y587 144 aa11.51□□□□□ -0.57
CAPN1-209ENST00000527469 ARFGEF3Q5TH69 2177 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 VPS13CQ709C8 3753 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 PLSCR5A0PG75 271 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 TP53P04637 393 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-209ENST00000527469 GAAP10253 952 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 SLC25A16P16260 332 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 PAICSP22234 425 aaKnown RBP11.5□□□□□ -0.57
CAPN1-209ENST00000527469 FASP25445 335 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 PYCR1P32322 319 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 ERVS71-1P61550 626 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 PPP1CBP62140 327 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 MAD2L1BPQ15013 274 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-209ENST00000527469 KCNMB1Q16558 191 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 ALKBH6Q3KRA9 238 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 SLC27A4Q6P1M0 643 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 SHQ1Q6PI26 577 aaKnown RBP11.5□□□□□ -0.57
CAPN1-209ENST00000527469 VASH1Q7L8A9 365 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-209ENST00000527469 TMEM179BQ7Z7N9 219 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 ZBTB46Q86UZ6 589 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 LRP11Q86VZ4 500 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 ZNF101Q8IZC7 436 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 CIARTQ8N365 385 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-209ENST00000527469 IQCF1Q8N6M8 205 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 SLC37A3Q8NCC5 494 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 NPEPL1Q8NDH3 523 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 SLC26A10Q8NG04 563 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 OR9Q1Q8NGQ5 310 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 OR6K6Q8NGW6 343 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 OR4Q3Q8NH05 313 aa11.5□□□□□ -0.57
CAPN1-209ENST00000527469 SLCO4A1Q96BD0 722 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms