RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 DNAJC27Q9NZQ0 273 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 ASH2LQ9UBL3 628 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 FBN2P35556 2912 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 IGHV2OR16-5A0A0B4J2B6 119 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 OR6C6A6NF89 314 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 CASKO14936 926 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 FARS2O95363 451 aaKnown RBP9.32□□□□□ -0.92
NEDD8-205ENST00000527046 ALOX5APP20292 161 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 PTAFRP25105 342 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 APEX1P27695 318 aaKnown RBP9.32□□□□□ -0.92
NEDD8-205ENST00000527046 CAPGP40121 348 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 WNT5AP41221 380 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 CENPAP49450 140 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 CDC42P60953 191 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 NKX6-1P78426 367 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-205ENST00000527046 AQP6Q13520 282 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 MAD2L1BPQ15013 274 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-205ENST00000527046 SMN1Q16637 294 aaKnown RBP9.32□□□□□ -0.92
NEDD8-205ENST00000527046 SLC36A2Q495M3 483 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 KLHL12Q53G59 568 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 BEX5Q5H9J7 111 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 C6orf52Q5T4I8 152 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 ADAM5Q6NVV9 412 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 SSX8Q7RTT4 187 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 DPY19L4Q7Z388 723 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-205ENST00000527046 NAA40Q86UY6 237 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 CDC20BQ86Y33 519 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 PIP4P2Q8N4L2 257 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 RFLNBQ8N5W9 214 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 OR6K6Q8NGW6 343 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 IGFBPL1Q8WX77 278 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 SLC7A6Q92536 515 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-205ENST00000527046 OTULINQ96BN8 352 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 PIK3IP1Q96FE7 263 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF649Q9BS31 505 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 LIME1Q9H400 295 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 GDF2Q9UK05 429 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-205ENST00000527046 COPS3Q9UNS2 423 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 PCDHGB5Q9Y5G0 923 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 ORC6Q9Y5N6 252 aa9.32□□□□□ -0.92
NEDD8-205ENST00000527046 CACNA1DQ01668 2161 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 HRNRQ86YZ3 2850 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-205ENST00000527046 ROS1P08922 2347 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 C5orf63A6NC05 138 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 C12orf71A8MTZ7 269 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 E7EQL1 145 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 ATP6V1G2-DDX39BF2Z307 99 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 ABCD4O14678 606 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 DBHP09172 617 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 SBK2P0C263 348 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 PAICSP22234 425 aaKnown RBP9.31□□□□□ -0.92
NEDD8-205ENST00000527046 PAX7P23759 505 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 HTR1FP30939 366 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 SLC15A1P46059 708 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 CAPZA2P47755 286 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 ENTPD1P49961 510 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 BLVRAP53004 296 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 ADAM8P78325 824 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 TLE4Q04727 773 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 TMEM255AQ5JRV8 349 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF684Q5T5D7 378 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 TTC23Q5W5X9 447 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 KBTBD8Q8NFY9 601 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 OTOSQ8NHW6 89 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 PLEKHA8Q96JA3 519 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 ABHD6Q9BV23 337 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 TEX12Q9BXU0 123 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 RNF121Q9H920 327 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 SLC24A3Q9HC58 644 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 MRPS18AQ9NVS2 196 aaKnown RBP9.31□□□□□ -0.92
NEDD8-205ENST00000527046 KCNG2Q9UJ96 466 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 HECTD1Q9ULT8 2610 aa9.31□□□□□ -0.92
NEDD8-205ENST00000527046 MAGEB4O15481 346 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 SGCEO43556 437 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 ICMTO60725 284 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 APOL3O95236 402 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 GOSR1O95249 250 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 NGFP01138 241 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 HLA-DQA2P01906 255 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 MRPL3P09001 348 aaKnown RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 COX5BP10606 129 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 STOMP27105 288 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 OTX1P32242 354 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 NAA10P41227 235 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 PCBD1P61457 104 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 CDK5R2Q13319 367 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 IL18R1Q13478 541 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 MST1LQ2TV78 715 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 ELFN2Q5R3F8 820 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 TMEM53Q6P2H8 277 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 IZUMO2Q6UXV1 221 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 COLCA1Q6ZS62 124 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 SSX6Q7RTT6 188 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 SLC16A9Q7RTY1 509 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 PRSS45Q7RTY3 260 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 DCXRQ7Z4W1 244 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 ERI1Q8IV48 349 aaKnown RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF101Q8IZC7 436 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms