RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 C9orf139Q6ZV77 190 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 CCDC80Q76M96 950 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 OR2Z1Q8NG97 314 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 OR10A6Q8NH74 314 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 LRRC8CQ8TDW0 803 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 POLR2J2Q9GZM3 115 aaKnown RBP13.54□□□□□ -0.24
PTPRU-210ENST00000527027 POLR2J3Q9H1A7 115 aaKnown RBP13.54□□□□□ -0.24
PTPRU-210ENST00000527027 TUBG2Q9NRH3 451 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 OR5V1Q9UGF6 321 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 IL19Q9UHD0 177 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 NDRG4Q9ULP0 352 aaKnown RBP13.54□□□□□ -0.24
PTPRU-210ENST00000527027 PPP1R3CQ9UQK1 317 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 MED31Q9Y3C7 131 aa13.54□□□□□ -0.24
PTPRU-210ENST00000527027 NOTCH1P46531 2555 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 ANGPT2O15123 496 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 SURF4O15260 269 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 ABHD16AO95870 558 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 MDH2P40926 338 aaKnown RBP13.53□□□□□ -0.24
PTPRU-210ENST00000527027 RPL27P61353 136 aaKnown RBP13.53□□□□□ -0.24
PTPRU-210ENST00000527027 ALG10Q5BKT4 473 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 Q6ZR03 302 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 FOXL2NBQ6ZUU3 175 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 SYT9Q86SS6 491 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 NPEPL1Q8NDH3 523 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 TAF15Q92804 592 aaKnown RBP eCLIP13.53□□□□□ -0.24
PTPRU-210ENST00000527027 MAGEB18Q96M61 343 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 SIGLEC11Q96RL6 698 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 IL20RAQ9UHF4 553 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 HIF3AQ9Y2N7 669 aa13.53□□□□□ -0.24
PTPRU-210ENST00000527027 C12orf71A8MTZ7 269 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 WNT2P09544 360 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 COX5BP10606 129 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 THRBP10828 461 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 KITLGP21583 273 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 MDKP21741 143 aaPredicted RBP13.52□□□□□ -0.25
PTPRU-210ENST00000527027 CPT2P23786 658 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 GZMMP51124 257 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 TOP3AQ13472 1001 aaPredicted RBP13.52□□□□□ -0.25
PTPRU-210ENST00000527027 PIN1Q13526 163 aaPredicted RBP13.52□□□□□ -0.25
PTPRU-210ENST00000527027 NFYCQ13952 458 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 ENDOGQ14249 297 aaKnown RBP13.52□□□□□ -0.25
PTPRU-210ENST00000527027 OCLNQ16625 522 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 VMACQ2NL98 169 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 C16orf87Q6PH81 154 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 MUC20Q8N307 709 aaPredicted RBP13.52□□□□□ -0.25
PTPRU-210ENST00000527027 PARP8Q8N3A8 854 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 CLDN22Q8N7P3 220 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 ITLN1Q8WWA0 313 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 TMIGD2Q96BF3 282 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 FAM53CQ9NYF3 392 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 BAG5Q9UL15 447 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 LRCH1Q9Y2L9 728 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 MMP24Q9Y5R2 645 aa13.52□□□□□ -0.25
PTPRU-210ENST00000527027 SOX21Q9Y651 276 aaPredicted RBP13.52□□□□□ -0.25
PTPRU-210ENST00000527027 TANC2Q9HCD6 1990 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 IGHV3OR16-10A0A075B7F0 116 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 A0A1W2PPL8 197 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 HTR3EA5X5Y0 456 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 CEACAM18A8MTB9 384 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 TMEM178BH3BS89 294 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 SHOX2O60902 331 aaPredicted RBP13.51□□□□□ -0.25
PTPRU-210ENST00000527027 GPANK1O95872 356 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 TNFRSF1BP20333 461 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 MSR1P21757 451 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 MDH1P40925 334 aaKnown RBP13.51□□□□□ -0.25
PTPRU-210ENST00000527027 CTXN1P60606 82 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 PAX2Q02962 417 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 FAM205BPQ63HN1 556 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 BTNL3Q6UXE8 466 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 LRRN1Q6UXK5 716 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 JAZF1Q86VZ6 243 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 TSPEARQ8WU66 669 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 HAVCR1Q96D42 359 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 CMBLQ96DG6 245 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 OR2V2Q96R30 315 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 WACQ9BTA9 647 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 POFUT1Q9H488 388 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 STARD10Q9Y365 291 aa13.51□□□□□ -0.25
PTPRU-210ENST00000527027 CMYA5Q8N3K9 4069 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 A6NIZ1 184 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 IFNL4K9M1U5 179 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 PLATP00750 562 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 OMGP23515 440 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 RAP1BP61224 184 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 RAP1AP62834 184 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 SPATC1Q76KD6 591 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 PTP4A1Q93096 173 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 BPIFA2Q96DR5 249 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 THOC1Q96FV9 657 aaKnown RBP13.5□□□□□ -0.25
PTPRU-210ENST00000527027 SSBP3Q9BWW4 388 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-210ENST00000527027 GCM1Q9NP62 436 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 POLE4Q9NR33 117 aa13.5□□□□□ -0.25
PTPRU-210ENST00000527027 A0A1B0GUS0 222 aa13.49□□□□□ -0.25
PTPRU-210ENST00000527027 PIP5K1CO60331 668 aa13.49□□□□□ -0.25
PTPRU-210ENST00000527027 SCG5P05408 212 aa13.49□□□□□ -0.25
PTPRU-210ENST00000527027 OR1E2P47887 323 aa13.49□□□□□ -0.25
PTPRU-210ENST00000527027 NANOGP8Q6NSW7 305 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms