RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 PLEKHA8Q96JA3 519 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 OR2M2Q96R28 347 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 ARHGDIGQ99819 225 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 SH3GL3Q99963 347 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 SEMA6AQ9H2E6 1030 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 KIF17Q9P2E2 1029 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 NKX1-2Q9UD57 310 aaPredicted RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 NDRG4Q9ULP0 352 aaKnown RBP4.38□□□□□ -1.71
SF3B2-205ENST00000526653 SLC35A3Q9Y2D2 325 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 LRCH1Q9Y2L9 728 aa4.38□□□□□ -1.71
SF3B2-205ENST00000526653 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 A0A1W2PRD5 423 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 A0A1W2PRF3 423 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 A0A1W2PRM7 423 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 BTBD17A6NE02 478 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 A8MVM7 634 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 RNASEK-C17orf49H0YIS7 233 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 H3BUI4 141 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 P2RY10O00398 339 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 SEC31AO94979 1220 aaKnown RBP4.37□□□□□ -1.71
SF3B2-205ENST00000526653 UBL3O95164 117 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 C6orf47O95873 294 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 KRT16P08779 473 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 TFPTP0C1Z6 253 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 PNMTP11086 282 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 LAMP1P11279 417 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 CBLP22681 906 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 MDH2P40926 338 aaKnown RBP4.37□□□□□ -1.71
SF3B2-205ENST00000526653 KIR2DS4P43632 304 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 RPS5P46782 204 aaKnown RBP4.37□□□□□ -1.71
SF3B2-205ENST00000526653 EFNB2P52799 333 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 ARF6P62330 175 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 DR1Q01658 176 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 COX10Q12887 443 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 PMS2P3Q13401 168 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 SMU1Q2TAY7 513 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF718Q3SXZ3 478 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 TMEM255AQ5JRV8 349 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF678Q5SXM1 525 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 PXDC1Q5TGL8 231 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 C1orf140Q5VVS0 124 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 ATG16L1Q676U5 607 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 LYPD2Q6UXB3 125 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 ZCCHC23Q6ZST2 131 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 C16orf62Q7Z3J2 963 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 C6orf120Q7Z4R8 191 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 CCDC91Q7Z6B0 441 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 KRT77Q7Z794 578 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 KRT73Q86Y46 540 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 LRRC8AQ8IWT6 810 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 C20orf196Q8IYI0 205 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 CADM2Q8N3J6 435 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF283Q8N7M2 679 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 FAM71CQ8NEG0 241 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 SDR9C7Q8NEX9 313 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 OR2Z1Q8NG97 314 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 OR6N1Q8NGY5 312 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 LRTOMTQ8WZ04 291 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 OXGR1Q96P68 337 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF382Q96SR6 550 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 CITED2Q99967 270 aaPredicted RBP4.37□□□□□ -1.71
SF3B2-205ENST00000526653 MRPL57Q9BQC6 102 aaKnown RBP4.37□□□□□ -1.71
SF3B2-205ENST00000526653 THAP7Q9BT49 309 aaPredicted RBP4.37□□□□□ -1.71
SF3B2-205ENST00000526653 CHID1Q9BWS9 393 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 BCL2L14Q9BZR8 327 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 LRMDAQ9H2I8 198 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 MID1IP1Q9NPA3 183 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 RRAGDQ9NQL2 400 aaPredicted RBP4.37□□□□□ -1.71
SF3B2-205ENST00000526653 MIOXQ9UGB7 285 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 PPP1R3CQ9UQK1 317 aa4.37□□□□□ -1.71
SF3B2-205ENST00000526653 TET2Q6N021 2002 aaPredicted RBP4.37□□□□□ -1.71
SF3B2-205ENST00000526653 IGHV3-64DA0A0J9YX35 117 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 CFAP73A6NFT4 308 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 DUXAA6NLW8 204 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF726A6NNF4 738 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF879B4DU55 563 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 TMEM178BH3BS89 294 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 RAD51CO43502 376 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 TBX19O60806 448 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 CRCPO75575 148 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 ENO1P06733 434 aaKnown RBP4.36□□□□□ -1.71
SF3B2-205ENST00000526653 GRPP07492 148 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 GSTA2P09210 222 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 CCDC159P0C7I6 412 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 GKN3PP0CG01 181 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 HLA-DOBP13765 273 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 IMPDH1P20839 514 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 CFHR2P36980 270 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 PITPNBP48739 271 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 SERPINB8P50452 374 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 TPTEP56180 551 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 PRB3Q04118 309 aaPredicted RBP4.36□□□□□ -1.71
SF3B2-205ENST00000526653 LY6EQ16553 131 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 PGS1Q32NB8 556 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 RFTN2Q52LD8 501 aaPredicted RBP4.36□□□□□ -1.71
SF3B2-205ENST00000526653 XKR7Q5GH72 579 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 FAM201AQ5SY85 155 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 AP1ARQ63HQ0 302 aa4.36□□□□□ -1.71
SF3B2-205ENST00000526653 TYW3Q6IPR3 259 aaKnown RBP4.36□□□□□ -1.71
SF3B2-205ENST00000526653 PIWIL3Q7Z3Z3 882 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms