RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ZNF300Q96RE9 604 aaPredicted RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 WFDC6Q9BQY6 131 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 SRSF8Q9BRL6 282 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 FNDC11Q9BVV2 318 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 POLR2J2Q9GZM3 115 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 SLC5A7Q9GZV3 580 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 POLR2J3Q9H1A7 115 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 DEFB127Q9H1M4 99 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ESRP2Q9H6T0 727 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 SCPEP1Q9HB40 452 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 S100A14Q9HCY8 104 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.95□□□□□ -1.78
USP48-211ENST00000526044 ACER3Q9NUN7 267 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ARMC1Q9NVT9 282 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 B4GALT7Q9UBV7 327 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 IL19Q9UHD0 177 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 RIMS3Q9UJD0 308 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 FBXL2Q9UKC9 423 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 MRPS18CQ9Y3D5 142 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 ADAM18Q9Y3Q7 739 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ENPP4Q9Y6X5 453 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 AKAP13Q12802 2813 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 FREM3P0C091 2139 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 NCKAP5O14513 1909 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 SPTBN4Q9H254 2564 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 SAA2-SAA4A0A096LPE2 208 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 TMED7-TICAM2A0A0A6YYA0 188 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 A0A0G2JMM0 328 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 A0A1W2PPB8 328 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 A0A1W2PRS3 328 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 CPSF4LA6NMK7 179 aaKnown RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 C17orf51A8MQB3 221 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 FAM166BA8MTA8 275 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 KIR3DP1A8MWS1 328 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 LDLRAD4O15165 306 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 ADAMDEC1O15204 470 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 CLOCKO15516 846 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 SPRY1O43609 319 aaPredicted RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 KRT36O76013 467 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 GLSO94925 669 aaPredicted RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 DIRAS1O95057 198 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 OR5F1O95221 314 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 GADD45GO95257 159 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 PMS2P2O95744 297 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 CST1P01037 141 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 LDLRP01130 860 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 MT-ND1P03886 318 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 SEMG1P04279 462 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 HPNP05981 417 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 H1F0P07305 194 aaKnown RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 THRBP10828 461 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 PNMTP11086 282 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 TCEA1P23193 301 aaKnown RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 PAX7P23759 505 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 CXCR1P25024 350 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 FASP25445 335 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 FKBP2P26885 142 aaKnown RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 SRD5A2P31213 254 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 RRM2P31350 389 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 CDAP32320 146 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 MC5RP33032 325 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 GCKP35557 465 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 RFC3P40938 356 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 APOBEC1P41238 236 aaKnown RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 MAGEA5P43359 124 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 PITPNBP48739 271 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 POLR2HP52434 150 aaKnown RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 ARHGDIAP52565 204 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 ERVFC1-1P60608 527 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 VLDLRP98155 873 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 SORDQ00796 357 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 MERTKQ12866 999 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 KLRB1Q12918 225 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 GANABQ14697 944 aaKnown RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 TRAM2Q15035 370 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 TOMM34Q15785 309 aaPredicted RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 NPTX1Q15818 432 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 C2orf68Q2NKX9 166 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 IQCCQ4KMZ1 466 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 SLC25A53Q5H9E4 307 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 DCST1Q5T197 706 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 OR2T5Q6IEZ7 315 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 ZNF613Q6PF04 617 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 TTC33Q6PID6 262 aaPredicted RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 ARSKQ6UWY0 536 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 GRINAQ7Z429 371 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 TSEN54Q7Z6J9 526 aaKnown RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 CDK20Q8IZL9 346 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 TMEM251Q8N6I4 163 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 DRAXINQ8NBI3 349 aaPredicted RBP3.94□□□□□ -1.78
USP48-211ENST00000526044 OR5M1Q8NGP8 315 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 OR2T29Q8NH02 315 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 OR14L1PQ8NHC6 308 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 ADAMTS16Q8TE57 1224 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 ST8SIA1Q92185 356 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 CORO2AQ92828 525 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 SLC38A4Q969I6 547 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 ITFG2Q969R8 447 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 SLC41A3Q96GZ6 507 aa3.94□□□□□ -1.78
USP48-211ENST00000526044 PRRC1Q96M27 445 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms