RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 IPCEF1Q8WWN9 437 aaPredicted RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 SLC25A44Q96H78 314 aaPredicted RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 LRGUKQ96M69 825 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 C1orf147Q96MC9 270 aaPredicted RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 CADM1Q9BY67 442 aaKnown RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 BCL2L14Q9BZR8 327 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 MS4A7Q9GZW8 240 aaPredicted RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 PCDHAC1Q9H158 963 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 KCNN2Q9H2S1 579 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 MAGIXQ9H6Y5 334 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 ZNF696Q9H7X3 374 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 YY1AP1Q9H869 796 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 NTN4Q9HB63 628 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 NANSQ9NR45 359 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 DCAF13Q9NV06 445 aaKnown RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 NKIRAS2Q9NYR9 191 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 TESQ9UGI8 421 aaKnown RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 NUP50Q9UKX7 468 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 ANK2Q01484 3957 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 HTR3EA5X5Y0 456 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 TIMM8AO60220 97 aaPredicted RBP5.55□□□□□ -1.52
CD44-221ENST00000526000 FZD7O75084 574 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 FOXH1O75593 365 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 MT-ATP6P00846 226 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 PTHP01270 115 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 IGHV3-13P01766 116 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 IGHG1P01857 330 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 MMP7P09237 267 aaPredicted RBP5.55□□□□□ -1.52
CD44-221ENST00000526000 IGHV4-38-2P0DP08 117 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 THRBP10828 461 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 ACADSP16219 412 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 TNFRSF1BP20333 461 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 CD247P20963 164 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 CD80P33681 288 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 PPP1CBP62140 327 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 PSG4Q00888 419 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 CD47Q08722 323 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 ZNF154Q13106 437 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 FLOT2Q14254 428 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 TAF11Q15544 211 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 LRRC23Q53EV4 343 aaPredicted RBP5.55□□□□□ -1.52
CD44-221ENST00000526000 IFI44LQ53G44 452 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 CYBRD1Q53TN4 286 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 ZNF774Q6NX45 483 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 C1orf94Q6P1W5 598 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 LINC00114Q6XXX2 140 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 SPATC1Q76KD6 591 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 NANOGNBQ7Z5D8 188 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 NKAIN4Q8IVV8 208 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 OR5AS1Q8N127 324 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 CLDN22Q8N7P3 220 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 OR2Z1Q8NG97 314 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 OR52E2Q8NGJ4 325 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 PFN4Q8NHR9 129 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 KLF14Q8TD94 323 aaPredicted RBP5.55□□□□□ -1.52
CD44-221ENST00000526000 ADAMTS16Q8TE57 1224 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 HDAC2Q92769 488 aaKnown RBP5.55□□□□□ -1.52
CD44-221ENST00000526000 TAMM41Q96BW9 452 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 MARS2Q96GW9 593 aaKnown RBP5.55□□□□□ -1.52
CD44-221ENST00000526000 POM121L2Q96KW2 1035 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 ARHGDIGQ99819 225 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 TMEM43Q9BTV4 400 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 EGLN1Q9GZT9 426 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 POFUT1Q9H488 388 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 MEPEQ9NQ76 525 aaPredicted RBP5.55□□□□□ -1.52
CD44-221ENST00000526000 PURGQ9UJV8 347 aaKnown RBP5.55□□□□□ -1.52
CD44-221ENST00000526000 FBXL3Q9UKT7 428 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 NPTNQ9Y639 398 aa5.55□□□□□ -1.52
CD44-221ENST00000526000 A0A1W2PPL8 197 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 A0A1W2PRG6 482 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 TRAPPC13A5PLN9 417 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 ACOT8O14734 319 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 CHP2O43745 196 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 MGRN1O60291 552 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 OR5F1O95221 314 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 SERPINA1P01009 418 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 FSHBP01225 129 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 IFNW1P05000 195 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 SCG5P05408 212 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 LAP3P28838 519 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 MMP15P51511 669 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 UGT2B15P54855 530 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 SMIM11AP58511 58 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 RPL18Q07020 188 aaKnown RBP5.54□□□□□ -1.52
CD44-221ENST00000526000 SLC3A1Q07837 685 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 PSG7Q13046 419 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 SLC9A3R2Q15599 337 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 FAM98BQ52LJ0 330 aaKnown RBP5.54□□□□□ -1.52
CD44-221ENST00000526000 FAM201AQ5SY85 155 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 ZNF613Q6PF04 617 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 RFPL4BQ6ZWI9 263 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 FKBP9P1Q75LS8 142 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 DOK3Q7L591 496 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 IGFN1Q86VF2 1251 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 CYP4Z1Q86W10 505 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 C1QL4Q86Z23 238 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 RNF148Q8N7C7 305 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 ATG16L2Q8NAA4 619 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 ZNF420Q8TAQ5 688 aaPredicted RBP5.54□□□□□ -1.52
CD44-221ENST00000526000 ITLN1Q8WWA0 313 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms