RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 MICU2Q8IYU8 434 aa21.77■■□□□ 1.08
PVT1-219ENST00000523427 SIGLEC11Q96RL6 698 aa21.77■■□□□ 1.08
PVT1-219ENST00000523427 ALG12Q9BV10 488 aa21.77■■□□□ 1.08
PVT1-219ENST00000523427 EMC7Q9NPA0 242 aa21.77■■□□□ 1.08
PVT1-219ENST00000523427 GMNCA6NCL1 334 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 CEACAM18A8MTB9 384 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 A8MXK9 166 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 MDH2P40926 338 aaKnown RBP21.76■■□□□ 1.07
PVT1-219ENST00000523427 OR1E2P47887 323 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 RPL27P61353 136 aaKnown RBP21.76■■□□□ 1.07
PVT1-219ENST00000523427 PAX8Q06710 450 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 ENDOGQ14249 297 aaKnown RBP21.76■■□□□ 1.07
PVT1-219ENST00000523427 C16orf87Q6PH81 154 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 ATG16L2Q8NAA4 619 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 RASSF5Q8WWW0 418 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 OR2V2Q96R30 315 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 SLITRK2Q9H156 845 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 RABEP2Q9H5N1 569 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 MAN2C1Q9NTJ4 1040 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 VWFP04275 2813 aa21.76■■□□□ 1.07
PVT1-219ENST00000523427 TRAV40A0A0B4J280 105 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 IGHV3-64DA0A0J9YX35 117 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 C12orf71A8MTZ7 269 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 F5H0A9 414 aaPredicted RBP21.75■■□□□ 1.07
PVT1-219ENST00000523427 H7C1C5 153 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 CLDN34H7C241 214 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 MSR1P21757 451 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 HTR5AP47898 357 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 CTXN1P60606 82 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 LCN6P62502 163 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 VMACQ2NL98 169 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 BTNL3Q6UXE8 466 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 OR5AS1Q8N127 324 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 DPP10Q8N608 796 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 ZDHHC16Q969W1 377 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 SSBP3Q9BWW4 388 aaPredicted RBP21.75■■□□□ 1.07
PVT1-219ENST00000523427 NDRG4Q9ULP0 352 aaKnown RBP21.75■■□□□ 1.07
PVT1-219ENST00000523427 STARD10Q9Y365 291 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 NOTCH1P46531 2555 aa21.75■■□□□ 1.07
PVT1-219ENST00000523427 TMEM178BH3BS89 294 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 SURF4O15260 269 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 HOXA3O43365 443 aaPredicted RBP21.74■■□□□ 1.07
PVT1-219ENST00000523427 ICMTO60725 284 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 OR5F1O95221 314 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 SCG5P05408 212 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 WNT2P09544 360 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 IFI30P13284 250 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 RPS2P15880 293 aaKnown RBP21.74■■□□□ 1.07
PVT1-219ENST00000523427 ERFP50548 548 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 OTPQ5XKR4 325 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 KIR3DL3Q8N743 410 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 ZNF420Q8TAQ5 688 aaPredicted RBP21.74■■□□□ 1.07
PVT1-219ENST00000523427 IL19Q9UHD0 177 aa21.74■■□□□ 1.07
PVT1-219ENST00000523427 DOK2O60496 412 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 TSPAN19P0C672 248 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 MUC20Q8N307 709 aaPredicted RBP21.73■■□□□ 1.07
PVT1-219ENST00000523427 NPEPL1Q8NDH3 523 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 OR51A7Q8NH64 312 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 LIPHQ8WWY8 451 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 SLC7A6Q92536 515 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 TBCCD1Q9NVR7 557 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 BAG5Q9UL15 447 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 LRCH1Q9Y2L9 728 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 HIF3AQ9Y2N7 669 aa21.73■■□□□ 1.07
PVT1-219ENST00000523427 NPIPB13A6NJU9 1138 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 NPIPB4C9JG80 1138 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 CYB5R3P00387 301 aaPredicted RBP21.72■■□□□ 1.07
PVT1-219ENST00000523427 KNG1P01042 644 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 MMP16P51512 607 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 GNB2P62879 340 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 LRRN1Q6UXK5 716 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 BRD3OSQ6XYD6 125 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 CCDC80Q76M96 950 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 OR10AD1Q8NGE0 317 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 GCM1Q9NP62 436 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 POLE4Q9NR33 117 aa21.72■■□□□ 1.07
PVT1-219ENST00000523427 TRAV27A0A087WT01 109 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 FAM181BA6NEQ2 426 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 THRBP10828 461 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 KITLGP21583 273 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 GZMMP51124 257 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 DEFB112Q30KQ8 113 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 C17orf107Q6ZR85 190 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 FOXL2NBQ6ZUU3 175 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 KLBQ86Z14 1044 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 FNDC8Q8TC99 324 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 UPRTQ96BW1 309 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 BPIFA2Q96DR5 249 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 PDP1Q9P0J1 537 aaPredicted RBP21.71■■□□□ 1.07
PVT1-219ENST00000523427 IL20RAQ9UHF4 553 aa21.71■■□□□ 1.07
PVT1-219ENST00000523427 IGHV2-70DA0A0C4DH43 119 aa21.7■■□□□ 1.06
PVT1-219ENST00000523427 SGCEO43556 437 aa21.7■■□□□ 1.06
PVT1-219ENST00000523427 IGF2P01344 180 aa21.7■■□□□ 1.06
PVT1-219ENST00000523427 RABL3Q5HYI8 236 aa21.7■■□□□ 1.06
PVT1-219ENST00000523427 SLC27A4Q6P1M0 643 aa21.7■■□□□ 1.06
PVT1-219ENST00000523427 POU5F2Q8N7G0 328 aa21.7■■□□□ 1.06
PVT1-219ENST00000523427 OR10S1Q8NGN2 331 aa21.7■■□□□ 1.06
PVT1-219ENST00000523427 DYDC1Q8WWB3 177 aa21.7■■□□□ 1.06
PVT1-219ENST00000523427 RAB40AQ8WXH6 277 aa21.7■■□□□ 1.06
PVT1-219ENST00000523427 HAVCR1Q96D42 359 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms