RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ABCG5Q9H222 651 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SLC25A32Q9H2D1 315 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 C1orf198Q9H425 327 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 PLEKHA2Q9HB19 425 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 ADGRL4Q9HBW9 690 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 RAB18Q9NP72 206 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SERHLQ9NQF3 203 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 AJAP1Q9UKB5 411 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SAMD4AQ9UPU9 718 aaKnown RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 NEU3Q9UQ49 428 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 KPTNQ9Y664 436 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 ASPMQ8IZT6 3477 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 TDRD6O60522 2096 aaKnown RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 MYOCOSA0A1B0GUC4 107 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 TMEM269A0A1B0GVZ9 245 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 A0A1W2PR77 199 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 C7orf72A4D263 438 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 OR2A25A4D2G3 310 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 CDHR4A6H8M9 788 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 PRORSD1PA6NEY8 169 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 C2CD4BA6NLJ0 364 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 CLDN24A6NM45 220 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 BTNL10A8MVZ5 291 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 C1QTNF9BB2RNN3 333 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 H0Y8X5 98 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 M0R233 179 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 SLC17A3O00476 420 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 KLF11O14901 512 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 AZIN1O14977 448 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 SC5DO75845 299 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 MMP23AO75900 390 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 OR2F2O95006 317 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 MATN4O95460 622 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 PRAMEF1O95521 474 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 TMEM50AO95807 157 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 KNG1P01042 644 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 GCGP01275 180 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 UCHL1P09936 223 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 HIST1H2AGP0C0S8 130 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 C1QTNF9P0C862 333 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 CD37P11049 281 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 SLC2A2P11168 524 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 IRF2P14316 349 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 UGT2B7P16662 529 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF14P17017 642 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 EGR1P18146 543 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 HIST1H2ADP20671 130 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 GPD1P21695 349 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 SLC6A2P23975 617 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 RPL4P36578 427 aaKnown RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 SLC6A12P48065 614 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 NPBWR2P48146 333 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 MMP16P51512 607 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 FOXL2P58012 376 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 RPL7AP62424 266 aaKnown RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 EGR4Q05215 589 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 JOSD1Q15040 202 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 TSNQ15631 228 aaKnown RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 EFNB3Q15768 340 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 MAPK14Q16539 360 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 ACSM3Q53FZ2 586 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 OXLD1Q5BKU9 147 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 NKAPLQ5M9Q1 402 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 PRAMEF17Q5VTA0 474 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 HIST2H2AA3Q6FI13 130 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 CAPN13Q6MZZ7 669 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 CDPF1Q6NVV7 123 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 WDR59Q6PJI9 974 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 FAM198BQ6UWH4 519 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 GSG1LQ6UXU4 331 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 SIAH3Q8IW03 269 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 MRPL41Q8IXM3 137 aaKnown RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 PARP16Q8N5Y8 322 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 OR4D5Q8NGN0 318 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 OR5M9Q8NGP3 310 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 TMEM163Q8TC26 289 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 SAP25Q8TEE9 199 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 SKA2Q8WVK7 121 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 RXFP2Q8WXD0 754 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 NRGNQ92686 78 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 ISOC2Q96AB3 205 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 ORAI1Q96D31 301 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 KLHDC7BQ96G42 594 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 C16orf58Q96GQ5 468 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 CDKN2AIPNLQ96HQ2 116 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 HIST1H2AHQ96KK5 128 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 GPR78Q96P69 363 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 PSMB7Q99436 277 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 HIST1H2AJQ99878 128 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 GINS4Q9BRT9 223 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 MECRQ9BV79 373 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 DUSP23Q9BVJ7 150 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 SUCNR1Q9BXA5 334 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 TEX101Q9BY14 249 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 C20orf85Q9H1P6 137 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 PIGMQ9H3S5 423 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 EGLN3Q9H6Z9 239 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 G6PC2Q9NQR9 355 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 NECAP2Q9NVZ3 263 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms