RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FKBP6O75344 327 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 SCRG1O75711 98 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 AQP8O94778 261 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 TBX6O95947 436 aaPredicted RBP3.29□□□□□ -1.88
SKP1-209ENST00000522552 BMP15O95972 392 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 PRSS2P07478 247 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 CT45A6P0DMU7 189 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 CT45A5P0DMU8 189 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 CT45A7P0DMV0 189 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 HSD17B1P14061 328 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 GFAPP14136 432 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 DCTP40126 519 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 LSM6P62312 80 aaKnown RBP3.29□□□□□ -1.88
SKP1-209ENST00000522552 MRPS11P82912 194 aaKnown RBP3.29□□□□□ -1.88
SKP1-209ENST00000522552 PUDPQ08623 228 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 C2orf54Q08AI8 447 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 SMARCB1Q12824 385 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 ELAVL2Q12926 359 aaKnown RBP3.29□□□□□ -1.88
SKP1-209ENST00000522552 GPNMBQ14956 572 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 GUSBP1Q15486 140 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 ZNF726P1Q15940 193 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 RFX4Q33E94 735 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 NSUN5P1Q3KNT7 163 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 CT45A1Q5HYN5 189 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 MEDAGQ5VYS4 303 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 WDR82Q6UXN9 313 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 WDFY1Q8IWB7 410 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 BBS7Q8IWZ6 715 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 ARRDC1Q8N5I2 433 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 OR52B6Q8NGF0 335 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 OR5AR1Q8NGP9 310 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 CT45A3Q8NHU0 189 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 MCOLN3Q8TDD5 553 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 CRYGNQ8WXF5 182 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 RAD51AP1Q96B01 352 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 ZNF354BQ96LW1 612 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 BARHL1Q9BZE3 327 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 CHIAQ9BZP6 476 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 ACTR6Q9GZN1 396 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 RNF167Q9H6Y7 350 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 RDH14Q9HBH5 336 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 TIGARQ9NQ88 270 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 DEPPQ9NTK1 212 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 THYN1Q9P016 225 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 PRODH2Q9UF12 536 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 MTCH2Q9Y6C9 303 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 RLFQ13129 1914 aa3.29□□□□□ -1.88
SKP1-209ENST00000522552 IGKV1D-8A0A087WSZ0 117 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 KIR2DS1A0A191URI9 304 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 B4DXG7 233 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 F5H768 121 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 G3V3Y1 287 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 M0QZ92 97 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 M0R036 132 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 ACOT8O14734 319 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 HAT1O14929 419 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 GATCO43716 136 aaKnown RBP3.28□□□□□ -1.88
SKP1-209ENST00000522552 HPGDSO60760 199 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 TRMUO75648 421 aaKnown RBP3.28□□□□□ -1.88
SKP1-209ENST00000522552 RAB36O95755 333 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 TCRBP04435 133 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 ARG1P05089 322 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 OR4E1P0C645 316 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 ATP6V1B2P21281 511 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 LOXP28300 417 aaPredicted RBP3.28□□□□□ -1.88
SKP1-209ENST00000522552 IDH2P48735 452 aaKnown RBP3.28□□□□□ -1.88
SKP1-209ENST00000522552 RAB7AP51149 207 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 EFNA3P52797 238 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 SUB1P53999 127 aaKnown RBP eCLIP3.28□□□□□ -1.883e-16■■■■■ 72.7
SKP1-209ENST00000522552 AQP5P55064 265 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 PAX9P55771 341 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 TGFBR3Q03167 851 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 ST3GAL4Q11206 333 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 MLLT11Q13015 90 aaPredicted RBP3.28□□□□□ -1.88
SKP1-209ENST00000522552 KCNJ11Q14654 390 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 KIR2DS1Q14954 304 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 PDZD11Q5EBL8 140 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 FHL5Q5TD97 284 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 ZNF626Q68DY1 528 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 TFAP2EQ6VUC0 442 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 C12orf54Q6X4T0 127 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 ZNF627Q7L945 461 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 MRPL52Q86TS9 123 aaKnown RBP3.28□□□□□ -1.88
SKP1-209ENST00000522552 HORMAD1Q86X24 394 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 NAXDQ8IW45 347 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 CA13Q8N1Q1 262 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 TMEM178AQ8NBL3 297 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 OR5B17Q8NGF7 314 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 OR5L1Q8NGL2 311 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 DYNC2LI1Q8TCX1 351 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 FAM222BQ8WU58 562 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 SLC25A38Q96DW6 304 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 CNRIP1Q96F85 164 aaPredicted RBP3.28□□□□□ -1.88
SKP1-209ENST00000522552 PRAP1Q96NZ9 151 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 TSNAXQ99598 290 aaKnown RBP3.28□□□□□ -1.88
SKP1-209ENST00000522552 KCTD14Q9BQ13 255 aaPredicted RBP3.28□□□□□ -1.88
SKP1-209ENST00000522552 HCAR1Q9BXC0 346 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 CALN1Q9BXU9 219 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 ACOT13Q9NPJ3 140 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 BTNL2Q9UIR0 455 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms