RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RACGAP1Q9H0H5 632 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 FN3KQ9H479 309 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 TBC1D23Q9NUY8 699 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 ASH2LQ9UBL3 628 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 NSD1Q96L73 2696 aaPredicted RBP17.73■□□□□ 0.43
TRIM35-203ENST00000521253 C2CD3Q4AC94 2353 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 M0R233 179 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 CLPTM1O96005 669 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 TP53P04637 393 aaPredicted RBP17.72■□□□□ 0.43
TRIM35-203ENST00000521253 HEXAP06865 529 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 CSF3P09919 207 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 ZNF250P15622 560 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 ALDH3B1P43353 468 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 CBX1P83916 185 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 MAD2L1BPQ15013 274 aaPredicted RBP17.72■□□□□ 0.43
TRIM35-203ENST00000521253 MEP1BQ16820 701 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 CD300LDQ6UXZ3 194 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.72■□□□□ 0.43
TRIM35-203ENST00000521253 ZBTB46Q86UZ6 589 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 PAPD5Q8NDF8 572 aaKnown RBP17.72■□□□□ 0.43
TRIM35-203ENST00000521253 NPEPL1Q8NDH3 523 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 OR1J1Q8NGS3 322 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 C10orf105Q8TEF2 133 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 SLCO4A1Q96BD0 722 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 TSSK6Q9BXA6 273 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 TPK1Q9H3S4 243 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 YY1AP1Q9H869 796 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 EIF3KQ9UBQ5 218 aaKnown RBP17.72■□□□□ 0.43
TRIM35-203ENST00000521253 REV1Q9UBZ9 1251 aa17.72■□□□□ 0.43
TRIM35-203ENST00000521253 NDRG4Q9ULP0 352 aaKnown RBP17.72■□□□□ 0.43
TRIM35-203ENST00000521253 A0A1W2PPW3 197 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 ARRDC5A6NEK1 342 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 SGCEO43556 437 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 DOK2O60496 412 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 COX5BP10606 129 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 ZNF362Q5T0B9 420 aaPredicted RBP17.71■□□□□ 0.43
TRIM35-203ENST00000521253 RFPL4BQ6ZWI9 263 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 VASH1Q7L8A9 365 aaPredicted RBP17.71■□□□□ 0.43
TRIM35-203ENST00000521253 LNX2Q8N448 690 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 CYB561A3Q8NBI2 242 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 OR4Q3Q8NH05 313 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 SYNPRQ8TBG9 265 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 DDOQ99489 341 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 ARMC1Q9NVT9 282 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 PLEK2Q9NYT0 353 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 PDP1Q9P0J1 537 aaPredicted RBP17.71■□□□□ 0.43
TRIM35-203ENST00000521253 POLR1DQ9Y2S0 133 aa17.71■□□□□ 0.43
TRIM35-203ENST00000521253 IGLV3-9A0A075B6K5 115 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 A0A096LNT2 108 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 ICMTO60725 284 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 E2F6O75461 281 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 TFP02787 698 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 ERCC1P07992 297 aaPredicted RBP17.7■□□□□ 0.42
TRIM35-203ENST00000521253 HTR5AP47898 357 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 KLF3P57682 345 aaPredicted RBP17.7■□□□□ 0.42
TRIM35-203ENST00000521253 SELENOVP59797 346 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 GLO1Q04760 184 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 COX10Q12887 443 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 ALKBH6Q3KRA9 238 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 SPATA46Q5T0L3 261 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 HS3ST5Q8IZT8 346 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 SLC26A10Q8NG04 563 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 OR2T33Q8NG76 320 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 ABHD4Q8TB40 342 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 NEU4Q8WWR8 484 aaPredicted RBP17.7■□□□□ 0.42
TRIM35-203ENST00000521253 MMADHCQ9H3L0 296 aaPredicted RBP17.7■□□□□ 0.42
TRIM35-203ENST00000521253 MS4A5Q9H3V2 200 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 DNAJB9Q9UBS3 223 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 LHFPL6Q9Y693 200 aa17.7■□□□□ 0.42
TRIM35-203ENST00000521253 RER1O15258 196 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 NGFP01138 241 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 NAT2P11245 290 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 SLC25A16P16260 332 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 PDLIM4P50479 330 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 CARTPTQ16568 116 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 NKPD1Q17RQ9 610 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 SLC36A3Q495N2 470 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 CCDC92Q53HC0 331 aaPredicted RBP17.69■□□□□ 0.42
TRIM35-203ENST00000521253 SLC37A3Q8NCC5 494 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 SLC7A6Q92536 515 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 C4orf45Q96LM5 186 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 MYOZ1Q9NP98 299 aaPredicted RBP17.69■□□□□ 0.42
TRIM35-203ENST00000521253 TAAR3PQ9P1P4 343 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 BAIAP2Q9UQB8 552 aa17.69■□□□□ 0.42
TRIM35-203ENST00000521253 OR6C6A6NF89 314 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 DAOP14920 347 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 TEKQ02763 1124 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 KRTAP1-1Q07627 177 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 CORO6Q6QEF8 472 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 UNQ6126/PRO20091Q6UXV3 157 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 OR1F12Q8NHA8 337 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 SLC25A40Q8TBP6 338 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 MARS2Q96GW9 593 aaKnown RBP17.68■□□□□ 0.42
TRIM35-203ENST00000521253 OR2J1Q9GZK6 312 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 ELOVL3Q9HB03 270 aa17.68■□□□□ 0.42
TRIM35-203ENST00000521253 LOC390937A0A1W2PQ73 354 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 H3BN98 237 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 NDUFS8O00217 210 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 TIPRLO75663 272 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 ABHD16AO95870 558 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms