RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 ERLIN1O75477 346 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 ZNF205O95201 554 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 MSR1P21757 451 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 IFNA8P32881 189 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 HTR5AP47898 357 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 SRP9P49458 86 aaKnown RBP9.65□□□□□ -0.86
MRPS28-206ENST00000520946 WDR4P57081 412 aaKnown RBP9.65□□□□□ -0.86
MRPS28-206ENST00000520946 BPIFB3P59826 476 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 GUCY1A3Q02108 690 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 HNRNPA0Q13151 305 aaKnown RBP9.65□□□□□ -0.86
MRPS28-206ENST00000520946 LAPTM4AQ15012 233 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 ALG10Q5BKT4 473 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 EPGNQ6UW88 154 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 BRD3OSQ6XYD6 125 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 KLBQ86Z14 1044 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 C1orf87Q8N0U7 546 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 OR5AS1Q8N127 324 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 C10orf111Q8N326 155 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 MREGQ8N565 214 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 TBC1D15Q8TC07 691 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 HDAC2Q92769 488 aaKnown RBP9.65□□□□□ -0.86
MRPS28-206ENST00000520946 PTP4A1Q93096 173 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 NABP1Q96AH0 204 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 FAM71F1Q96KD3 344 aaPredicted RBP9.65□□□□□ -0.86
MRPS28-206ENST00000520946 NUDT16L1Q9BRJ7 211 aaKnown RBP9.65□□□□□ -0.86
MRPS28-206ENST00000520946 ALG12Q9BV10 488 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 TXNIPQ9H3M7 391 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 TBCCD1Q9NVR7 557 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 CLN8Q9UBY8 286 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 SH3GLB1Q9Y371 365 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 MED31Q9Y3C7 131 aa9.65□□□□□ -0.86
MRPS28-206ENST00000520946 A6NIZ1 184 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 F5H0A9 414 aaPredicted RBP9.64□□□□□ -0.87
MRPS28-206ENST00000520946 ANGPT2O15123 496 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 DOK2O60496 412 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 CYB5R3P00387 301 aaPredicted RBP9.64□□□□□ -0.87
MRPS28-206ENST00000520946 PLATP00750 562 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 HOXB9P17482 250 aaPredicted RBP9.64□□□□□ -0.87
MRPS28-206ENST00000520946 RBMXP38159 391 aaKnown RBP9.64□□□□□ -0.87
MRPS28-206ENST00000520946 RBM34P42696 430 aaKnown RBP9.64□□□□□ -0.87
MRPS28-206ENST00000520946 PITPNBP48739 271 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 ZNF133P52736 654 aaPredicted RBP9.64□□□□□ -0.87
MRPS28-206ENST00000520946 RAP1BP61224 184 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 RAP1AP62834 184 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 SCRN3Q0VDG4 424 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 TAF9Q16594 264 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 TUSC1Q2TAM9 212 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 TMEM255AQ5JRV8 349 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 WDR93Q6P2C0 686 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 SLC25A47Q6Q0C1 308 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 MAVSQ7Z434 540 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 GPR32P1Q8NGA4 272 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 OR5L1Q8NGL2 311 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 MOSPD2Q8NHP6 518 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 PFN4Q8NHR9 129 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 TMEM239Q8WW34 195 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 ZNF582Q96NG8 517 aaPredicted RBP9.64□□□□□ -0.87
MRPS28-206ENST00000520946 SEPHS2Q99611 448 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 RBM4BQ9BQ04 359 aaKnown RBP9.64□□□□□ -0.87
MRPS28-206ENST00000520946 PCGF1Q9BSM1 259 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 RABEP2Q9H5N1 569 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 IKZF5Q9H5V7 419 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 TCF7L1Q9HCS4 588 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 MEPEQ9NQ76 525 aaPredicted RBP9.64□□□□□ -0.87
MRPS28-206ENST00000520946 UGT2A1Q9Y4X1 527 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 RNF114Q9Y508 228 aa9.64□□□□□ -0.87
MRPS28-206ENST00000520946 KIR2DS1A0A191URI9 304 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 SGCEO43556 437 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 THY1P04216 161 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 KITLGP21583 273 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 MMP16P51512 607 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 PCBP3P57721 371 aaKnown RBP9.63□□□□□ -0.87
MRPS28-206ENST00000520946 MTPNP58546 118 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 CTXN1P60606 82 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 FGF12P61328 243 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 RPL27P61353 136 aaKnown RBP9.63□□□□□ -0.87
MRPS28-206ENST00000520946 HLXQ14774 488 aaPredicted RBP9.63□□□□□ -0.87
MRPS28-206ENST00000520946 ARMC4Q5T2S8 1044 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 ZNF620Q6ZNG0 422 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 DHDDSQ86SQ9 333 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 SYT9Q86SS6 491 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 C1QL4Q86Z23 238 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 FUNDC1Q8IVP5 155 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 POU5F2Q8N7G0 328 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 OR13G1Q8NGZ3 307 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 ZNF420Q8TAQ5 688 aaPredicted RBP9.63□□□□□ -0.87
MRPS28-206ENST00000520946 TMEM255BQ8WV15 326 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 HAVCR1Q96D42 359 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 CITED1Q99966 193 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 CPPED1Q9BRF8 314 aaPredicted RBP9.63□□□□□ -0.87
MRPS28-206ENST00000520946 CHIAQ9BZP6 476 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 GCM1Q9NP62 436 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 C1RLQ9NZP8 487 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 ARMCX1Q9P291 453 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.63□□□□□ -0.87
MRPS28-206ENST00000520946 BAG5Q9UL15 447 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 NDUFAF1Q9Y375 327 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 GMEB1Q9Y692 573 aa9.63□□□□□ -0.87
MRPS28-206ENST00000520946 V9GYY5 206 aaPredicted RBP9.63□□□□□ -0.87
MRPS28-206ENST00000520946 TGP01266 2768 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms