RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 BEX1Q9HBH7 125 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 MRM3Q9HC36 420 aaKnown RBP2.92□□□□□ -1.94
SQLE-204ENST00000520493 AIG1Q9NVV5 245 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 MCUBQ9NWR8 336 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 CD274Q9NZQ7 290 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 CLCF1Q9UBD9 225 aa2.92□□□□□ -1.94
SQLE-204ENST00000520493 JCADQ9P266 1359 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 IGKV1D-13A0A0B4J2D9 117 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 A0A0G2JLM5 398 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 A0A1B0GW55 424 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 F6UB75 175 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 H0YHG0 523 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 H3BN98 237 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 PLPP1O14494 284 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 RFXANKO14593 260 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 TNFSF11O14788 317 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 SLC31A2O15432 143 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 ERI3O43414 337 aaKnown RBP2.91□□□□□ -1.94
SQLE-204ENST00000520493 RAD51CO43502 376 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 C6orf47O95873 294 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 DUX4L2P0CJ85 424 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 DUX4L3P0CJ86 424 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 DUX4L5P0CJ88 424 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 DUX4L6P0CJ89 424 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 DUX4L7P0CJ90 424 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 IGKV1-13P0DP09 117 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 HPGDP15428 266 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 FMO3P31513 532 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 ATP5J2P56134 94 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 TAS2R39P59534 338 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 ATP6V0D1P61421 351 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 IGLV3-21P80748 117 aaPredicted RBP2.91□□□□□ -1.94
SQLE-204ENST00000520493 UNC119Q13432 240 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 ZNF726P1Q15940 193 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 GABRA6Q16445 453 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 KYAT1Q16773 422 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 DUX4L9Q6RFH8 374 aaPredicted RBP2.91□□□□□ -1.94
SQLE-204ENST00000520493 ERO1BQ86YB8 467 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 ZNF547Q8IVP9 402 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 VKORC1L1Q8N0U8 176 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 SYS1Q8N2H4 156 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 OR10H4Q8NGA5 316 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 OR51F2Q8NH61 342 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 CLHC1Q8NHS4 586 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 ANGPTL6Q8NI99 470 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 C7orf33Q8WU49 177 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 SDR42E1Q8WUS8 393 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 EEF1AKMT3Q96AZ1 226 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 CYYR1Q96J86 154 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 P2RX4Q99571 388 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 GPR21Q99679 349 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 FOXC2Q99958 501 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 CHID1Q9BWS9 393 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 HINT2Q9BX68 163 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 POLR2J2Q9GZM3 115 aaKnown RBP2.91□□□□□ -1.94
SQLE-204ENST00000520493 POLR2J3Q9H1A7 115 aaKnown RBP2.91□□□□□ -1.94
SQLE-204ENST00000520493 ARMC7Q9H6L4 198 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 EML4Q9HC35 981 aaKnown RBP2.91□□□□□ -1.94
SQLE-204ENST00000520493 TNFRSF19Q9NS68 423 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 DUX4Q9UBX2 424 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 CLEC4EQ9ULY5 219 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 CELA1Q9UNI1 258 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 VSIG4Q9Y279 399 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 SLC25A15Q9Y619 301 aa2.91□□□□□ -1.94
SQLE-204ENST00000520493 RAI1Q7Z5J4 1906 aaPredicted RBP2.91□□□□□ -1.94
SQLE-204ENST00000520493 KIR2DL5BA0A0G2JN68 375 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 KIR2DL5BA0A0G2JPC4 375 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 KLF18A0A0U1RQI7 1052 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 A0A1B0GVI7 797 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 NUPL2O15504 423 aaKnown RBP2.9□□□□□ -1.95
SQLE-204ENST00000520493 DPM1O60762 260 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 MPDU1O75352 247 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 SRP72O76094 671 aaKnown RBP2.9□□□□□ -1.95
SQLE-204ENST00000520493 SMC2O95347 1197 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 PLEKHA8P1O95397 391 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 TDP2O95551 362 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 AIFM1O95831 613 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 TIMP1P01033 207 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 ARG1P05089 322 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 RAB4AP20338 218 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 GABRR1P24046 479 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 COX7A1P24310 79 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 SEMG2Q02383 582 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 AQP6Q13520 282 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 ARFRP1Q13795 201 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 ANGPT1Q15389 498 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 PTPN20Q4JDL3 420 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 TPTE2P1Q5T6R2 138 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 WDR82Q6UXN9 313 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 NPSR1Q6W5P4 371 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 ZNF621Q6ZSS3 439 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 TMEM179Q6ZVK1 233 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 H2AFVQ71UI9 128 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 NDUFAF7Q7L592 441 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 TMEM179BQ7Z7N9 219 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 KIR2DL5AQ8N109 375 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 KIF2BQ8N4N8 673 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 NOXO1Q8NFA2 376 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 OR10G9Q8NGN4 311 aa2.9□□□□□ -1.95
SQLE-204ENST00000520493 OR6N2Q8NGY6 317 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms