RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 RPA3P35244 121 aaPredicted RBP5.52□□□□□ -1.53
LSM1-202ENST00000520286 HSPA13P48723 471 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 MARCKSL1P49006 195 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 MICBQ29980 383 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 KLF17Q5JT82 389 aaPredicted RBP5.52□□□□□ -1.53
LSM1-202ENST00000520286 LPCAT4Q643R3 524 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 C16orf87Q6PH81 154 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 ZNF677Q86XU0 584 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 OR4F6Q8NGB9 312 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 DCUN1D1Q96GG9 259 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 KCNA7Q96RP8 456 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 DOK1Q99704 481 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 SH3GL1Q99961 368 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 RIOK1Q9BRS2 568 aaKnown RBP5.52□□□□□ -1.53
LSM1-202ENST00000520286 DRC3Q9H069 523 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 NCOR1P1Q9H4R4 102 aa5.52□□□□□ -1.53
LSM1-202ENST00000520286 A0A0G2JRQ6 117 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 OR2AG2A6NM03 316 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 H3BSA7 217 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 PFDN6O15212 129 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 KMOO15229 486 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 FAM189A1O60320 539 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 CACNG3O60359 315 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 SEMG1P04279 462 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 OCM2P0CE71 109 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 OCMP0CE72 109 aaPredicted RBP5.51□□□□□ -1.53
LSM1-202ENST00000520286 THRAP10827 490 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 PHBP35232 272 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 OR3A4PP47883 348 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 GSSP48637 474 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 MEOX2P50222 304 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 KPNA2P52292 529 aaKnown RBP5.51□□□□□ -1.53
LSM1-202ENST00000520286 ATP6V0D1P61421 351 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 DGUOKQ16854 277 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 CCDC14Q49A88 953 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 CAVIN4Q5BKX8 364 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 C1orf146Q5VVC0 180 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 PPP1R27Q86WC6 154 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 MARCH9Q86YJ5 346 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 ZNF525Q8N782 197 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 NEIL2Q969S2 332 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 FOXN4Q96NZ1 517 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 OSBPL10Q9BXB5 764 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 DEFB126Q9BYW3 111 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 PSTPIP2Q9H939 334 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 FBXO6Q9NRD1 293 aaPredicted RBP5.51□□□□□ -1.53
LSM1-202ENST00000520286 Q9UF83 564 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 PSMD13Q9UNM6 376 aa5.51□□□□□ -1.53
LSM1-202ENST00000520286 ALPK3Q96L96 1907 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 IGKV1D-8A0A087WSZ0 117 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 EXOC1LA0A1B0GW35 172 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 RSPH10B2B2RC85 870 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 LOC110117498-PIK3R3F6TDL0 507 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 SLC22A1O15245 554 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 BCL2L11O43521 198 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 PSTPIP1O43586 416 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 DFNA5O60443 496 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 SERF1AO75920 110 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 SERPIND1P05546 499 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 ASGR1P07306 291 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 RSPH10BP0C881 870 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 ATP6V1B2P21281 511 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 P2RY4P51582 365 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 GPM6AP51674 278 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 CDH6P55285 790 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 MECOMQ03112 1051 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 STX3Q13277 289 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 GNMTQ14749 295 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 C16orf72Q14CZ0 275 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 PARP15Q460N3 678 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 MFSD14CQ5VZR4 134 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 NANOGP8Q6NSW7 305 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 UNQ9370/PRO34162Q6UXP9 181 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 SLC39A11Q8N1S5 342 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 ACOT4Q8N9L9 421 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 CHCHD10Q8WYQ3 142 aaPredicted RBP5.5□□□□□ -1.53
LSM1-202ENST00000520286 MBOAT4Q96T53 435 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 CYTH2Q99418 400 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 CNPY3Q9BT09 278 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 PORCNQ9H237 461 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 EXO5Q9H790 373 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 ZNF702PQ9H963 129 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 GID8Q9NWU2 228 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 STARD10Q9Y365 291 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 N6AMT1Q9Y5N5 214 aa5.5□□□□□ -1.53
LSM1-202ENST00000520286 MROH5Q6ZUA9 1318 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 IGHV1OR21-1A0A087WYE8 117 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 A0A0G2JND7 137 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 LOC105371267A0A1B0GV96 52 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 SERTM2A0A1B0GWG4 89 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 CCDC160A6NGH7 325 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 LRRIQ4A6NIV6 560 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 C9JVG2 144 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 OR7A10O76100 309 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 GAS8-AS1O95177 125 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 KLK3P07288 261 aaPredicted RBP5.49□□□□□ -1.53
LSM1-202ENST00000520286 SERPINA6P08185 405 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 FGF4P08620 206 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 POLR2MP0CAP2 368 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 MYL2P10916 166 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms