RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 EFHD2Q96C19 240 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 C12orf66Q96MD2 445 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 TBX15Q96SF7 602 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 COPS8Q99627 209 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 MCRIP2Q9BUT9 160 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ANGPTL4Q9BY76 406 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 UBXN6Q9BZV1 441 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 NXF5Q9H1B4 397 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 RHOJQ9H4E5 214 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 EXO5Q9H790 373 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 NANSQ9NR45 359 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 HRASLS2Q9NWW9 162 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 MLXQ9UH92 298 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 LCMT1Q9UIC8 334 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 NXT1Q9UKK6 140 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 KIAA1109Q2LD37 5005 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 SNTNA6NMZ2 147 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 G3V4G9 280 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 CASQ2O14958 399 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 TAPBPO15533 448 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF264O43296 627 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 MED7O43513 233 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 IDH3BO43837 385 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 ERLIN1O75477 346 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 TGM6O95932 706 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 LONP1P36776 959 aaKnown RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 HPCAL1P37235 193 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 TAGLN2P37802 199 aaKnown RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 EFNB2P52799 333 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 VSX2P58304 361 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 BST2Q10589 180 aaKnown RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 RAB40BQ12829 278 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 NECTIN1Q15223 517 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 PPP1R7Q15435 360 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 SNRNP35Q16560 246 aaKnown RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 NDUFA9Q16795 377 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 MICAQ29983 383 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 DEFB110Q30KQ9 67 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 TEX44Q53QW1 395 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 SFT2D3Q587I9 215 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 ARMC12Q5T9G4 340 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 OLFML2AQ68BL7 652 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 SPOPLQ6IQ16 392 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 CLEC4FQ8N1N0 589 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 MTURNQ8N3F0 131 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR1F12Q8NHA8 337 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 FLVCR1-AS1Q8TAF5 88 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 M1APQ8TC57 530 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 GSDMAQ96QA5 445 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 LITAFQ99732 161 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 OPRPNQ99935 248 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 MED18Q9BUE0 208 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 TUBB1Q9H4B7 451 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF385DQ9H6B1 395 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 METTL7AQ9H8H3 244 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 JPT2Q9H910 190 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 WDR54Q9H977 334 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC40A1Q9NP59 571 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 FAM120CQ9NX05 1096 aaKnown RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 KLHL28Q9NXS3 571 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 UTP6Q9NYH9 597 aaKnown RBP3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 CTSFQ9UBX1 484 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 CACNG5Q9UF02 275 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 C3orf18Q9UK00 162 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF221Q9UK13 617 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 CSMD3Q7Z407 3707 aa3.75□□□□□ -1.81
HMGB1P23-201ENST00000518743 TEX48A0A1B0GUV7 120 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR6C74A6NCV1 312 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 FAM166BA8MTA8 275 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 DEFB108AA8MXU0 73 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 B4DXG7 233 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 KRT14P02533 472 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 AMBPP02760 352 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZSCAN5DPP0CG00 497 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 COX6A1P12074 109 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC25A16P16260 332 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 USF1P22415 310 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 CCR1P32246 355 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 CDH5P33151 784 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 MAGEA8P43361 318 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 KPNA2P52292 529 aaKnown RBP3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 HILS1P60008 231 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 PLGLB1Q02325 96 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 GGTLC2Q14390 218 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 IL17AQ16552 155 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 CASC10Q5T4H9 136 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR4F3Q6IEY1 312 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 EMBQ6PCB8 327 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 KCNIP4Q6PIL6 250 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 LRRC31Q6UY01 552 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 ADAMTSL5Q6ZMM2 481 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 CCDC73Q6ZRK6 1079 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF720Q7Z2F6 126 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 LUZP2Q86TE4 346 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 NR2C2APQ86WQ0 139 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC38A6Q8IZM9 456 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 TMEM123Q8N131 208 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNRF1Q8ND25 227 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms