RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 RFC2P35250 354 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 REG1BP48304 166 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 NOVA1P51513 510 aaKnown RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CASP9P55211 416 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 RPS15AP62244 130 aaKnown RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 PPP2R5AQ15172 486 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 FAM133BQ5BKY9 247 aaKnown RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CT45A2Q5DJT8 189 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 PRAMEF8Q5VWM4 474 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 PRAMEF7Q5VXH5 474 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 METTL21CQ5VZV1 264 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 FAM104BQ5XKR9 115 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 PM20D1Q6GTS8 502 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CENPPQ6IPU0 288 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 H3F3CQ6NXT2 135 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CCDC137Q6PK04 289 aaKnown RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 C14orf37Q86TY3 774 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 LRRC28Q86X40 367 aaPredicted RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CPOQ8IVL8 374 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 FAM58AQ8N1B3 248 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CENPSQ8N2Z9 138 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CYB561A3Q8NBI2 242 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR52H1Q8NGJ2 320 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR4L1Q8NH43 312 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 APH1BQ8WW43 257 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 APOBEC3DQ96AK3 386 aaPredicted RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 TAMM41Q96BW9 452 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 SMARCD1Q96GM5 515 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZNF830Q96NB3 372 aaPredicted RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 ERMAPQ96PL5 475 aaPredicted RBP-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 CRB3Q9BUF7 120 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 KIFC1Q9BW19 673 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 ATG10Q9H0Y0 220 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZNF385DQ9H6B1 395 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 KCNIP1Q9NZI2 227 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 SPATA7Q9P0W8 599 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 TEKT2Q9UIF3 430 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 GRIN2BQ13224 1484 aa-2.39□□□□□ -2.79
SNORA40.16-201ENST00000517238 LOC100509620A0A075B734 347 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 A0A0J9YYE9 177 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 TRBC2A0A5B9 178 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 SOX15O60248 233 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 TXNDC12O95881 172 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 TRBC1P01850 177 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR5AC1P0C628 307 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 ANKRD34CP0C6C1 535 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 SPP1P10451 314 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 CD36P16671 472 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 USF1P22415 310 aaPredicted RBP-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 ANXA13P27216 316 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 PRDX2P32119 198 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 ACTN2P35609 894 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 P2RY2P41231 377 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 KCNK10P57789 538 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 IRF3Q14653 427 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 TNXAQ16473 311 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 BCL7AQ4VC05 210 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 LBHQ53QV2 105 aaPredicted RBP-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 PLEKHS1Q5SXH7 462 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZNF678Q5SXM1 525 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 MRPL2Q5T653 305 aaKnown RBP-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 RNF187Q5TA31 235 aaPredicted RBP-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 GDF5OSQ5U4N7 250 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 C9orf135Q5VTT2 229 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 RAB12Q6IQ22 244 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 CCDC80Q76M96 950 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 HDDC2Q7Z4H3 204 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 ECHDC2Q86YB7 292 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 FAM219AQ8IW50 185 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 TBC1D21Q8IYX1 336 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 ZADH2Q8N4Q0 377 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 LRRC17Q8N6Y2 441 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 TSPAN14Q8NG11 270 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR4M1Q8NGD0 313 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 SDR42E1Q8WUS8 393 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 FGF11Q92914 225 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 SPSB1Q96BD6 273 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 RSRC1Q96IZ7 334 aaKnown RBP-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 OR5B2Q96R09 309 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 GPR21Q99679 349 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 CITED1Q99966 193 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 CRNKL1Q9BZJ0 848 aaKnown RBP-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 KRT23Q9C075 422 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 TMEM185BQ9H7F4 350 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 GEMIN8Q9NWZ8 242 aaKnown RBP-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 HAO2Q9NYQ3 351 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 GALPQ9UBC7 116 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 NAGKQ9UJ70 344 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 GMPPBQ9Y5P6 360 aa-2.4□□□□□ -2.79
SNORA40.16-201ENST00000517238 NSG1A0A0A6YYJ2 146 aa-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 A8MWL6 223 aa-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 NDUFC2-KCTD14E9PQ53 114 aa-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 KLHL41O60662 606 aa-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 ERLIN1O75477 346 aa-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 SCO1O75880 301 aa-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 RAB3DO95716 219 aa-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 MYL1P05976 194 aa-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 ABCB1P08183 1280 aaPredicted RBP-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 NELFEP18615 380 aaKnown RBP-2.41□□□□□ -2.8
SNORA40.16-201ENST00000517238 AK4P27144 223 aaPredicted RBP-2.41□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms