RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 OR6V1Q8N148 313 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 CYB561A3Q8NBI2 242 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 SDR9C7Q8NEX9 313 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 OR52E2Q8NGJ4 325 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 OR8D4Q8NGM9 314 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 FNDC8Q8TC99 324 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 NEU4Q8WWR8 484 aaPredicted RBP9.83□□□□□ -0.84
VCAN-212ENST00000515397 YIPF5Q969M3 257 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 C4orf45Q96LM5 186 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 C1orf198Q9H425 327 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 RPRD1BQ9NQG5 326 aaKnown RBP9.83□□□□□ -0.84
VCAN-212ENST00000515397 ASH2LQ9UBL3 628 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 B9D1Q9UPM9 204 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 GRIP1Q9Y3R0 1128 aa9.83□□□□□ -0.84
VCAN-212ENST00000515397 OR6C68A6NDL8 312 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 ACOT8O14734 319 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 WNT9BO14905 357 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 GYG2O15488 501 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 SGCEO43556 437 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 SPRY3O43610 288 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 DOK2O60496 412 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 KRT36O76013 467 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 SOX14O95416 240 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 ERCC1P07992 297 aaPredicted RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 CSF3P09919 207 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 ZNF16P17020 682 aaPredicted RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 PYCR1P32322 319 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 IFNGR2P38484 337 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 MAGEA2P43356 314 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 HMGA2P52926 109 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 SELENOVP59797 346 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 PPP1CBP62140 327 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 CCNIQ14094 377 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 ZNF718Q3SXZ3 478 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 CCDC92Q53HC0 331 aaPredicted RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 SPRNQ5BIV9 151 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 CYB5R2Q6BCY4 276 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 OR2T5Q6IEZ7 315 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 ZNF770Q6IQ21 691 aaPredicted RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 TMEM154Q6P9G4 183 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 ZNF620Q6ZNG0 422 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 IL17RELQ6ZVW7 336 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 VASH1Q7L8A9 365 aaPredicted RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 TMEM179BQ7Z7N9 219 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 LINC00346Q8IVM7 164 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 GLB1L2Q8IW92 636 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 ARHGAP24Q8N264 748 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 ZNF786Q8N393 782 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 AQP11Q8NBQ7 271 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 OR51L1Q8NGJ5 315 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 OR2T29Q8NH02 315 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 KLF14Q8TD94 323 aaPredicted RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 ZNRF4Q8WWF5 429 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 IPCEF1Q8WWN9 437 aaPredicted RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 SLC7A6OSQ96CW6 309 aaPredicted RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 MARS2Q96GW9 593 aaKnown RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 LRGUKQ96M69 825 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 SNX18Q96RF0 628 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 CHID1Q9BWS9 393 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 BCL2L14Q9BZR8 327 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 MS4A5Q9H3V2 200 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 HINT3Q9NQE9 182 aaKnown RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 PLEK2Q9NYT0 353 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 PRPF19Q9UMS4 504 aaKnown RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 POLR1DQ9Y2S0 133 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 STARD10Q9Y365 291 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 SAMHD1Q9Y3Z3 626 aaKnown RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 CACNG2Q9Y698 323 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 YLPM1P49750 1951 aaKnown RBP9.82□□□□□ -0.84
VCAN-212ENST00000515397 MALRD1Q5VYJ5 2156 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 ATRQ13535 2644 aa9.82□□□□□ -0.84
VCAN-212ENST00000515397 IGLV3-9A0A075B6K5 115 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 IGLV1-36A0A0B4J1U3 117 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 LOC100289279A0A1B0GTE1 492 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 TVP23AA6NH52 213 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 C17orf100A8MU93 164 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 A8MV72 311 aaPredicted RBP9.81□□□□□ -0.84
VCAN-212ENST00000515397 ARPC3O15145 178 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 TPD52L2O43399 206 aaKnown RBP9.81□□□□□ -0.84
VCAN-212ENST00000515397 AHCYL1O43865 530 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 LILRA1O75019 489 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 CRLF1O75462 422 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 RENP00797 406 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 TFP02787 698 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 APEHP13798 732 aaKnown RBP9.81□□□□□ -0.84
VCAN-212ENST00000515397 GCH1P30793 250 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 RPS27P42677 84 aaKnown RBP9.81□□□□□ -0.84
VCAN-212ENST00000515397 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.81□□□□□ -0.84
VCAN-212ENST00000515397 RIN1Q13671 783 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 KRTAP21-3Q3LHN1 58 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 FAM98BQ52LJ0 330 aaKnown RBP9.81□□□□□ -0.84
VCAN-212ENST00000515397 C6orf52Q5T4I8 152 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 LYPD4Q6UWN0 246 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 ZNF771Q7L3S4 317 aaPredicted RBP9.81□□□□□ -0.84
VCAN-212ENST00000515397 ADCK1Q86TW2 530 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 ADGRG5Q8IZF4 528 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 NPEPL1Q8NDH3 523 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 CANT1Q8WVQ1 401 aa9.81□□□□□ -0.84
VCAN-212ENST00000515397 MSI2Q96DH6 328 aaKnown RBP9.81□□□□□ -0.84
VCAN-212ENST00000515397 ASB9Q96DX5 294 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms