RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 C12orf71A8MTZ7 269 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 F5H0A9 414 aaPredicted RBP12.65□□□□□ -0.38
DDR1-278ENST00000515233 NPPAP01160 153 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 GSTM3P21266 225 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 KITLGP21583 273 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 MSR1P21757 451 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 CPT2P23786 658 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 RAP1BP61224 184 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 RAP1AP62834 184 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 RABL3Q5HYI8 236 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 ERICH5Q6P6B1 374 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 Q6ZR03 302 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 NPEPL1Q8NDH3 523 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 THOC1Q96FV9 657 aaKnown RBP12.65□□□□□ -0.38
DDR1-278ENST00000515233 ZNF583Q96ND8 569 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 SIGLEC11Q96RL6 698 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 MRI1Q9BV20 369 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 TRRAPQ9Y4A5 3859 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 POM121CA8CG34 1229 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 CLDN34H7C241 214 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 PIP5K1CO60331 668 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 ABHD16AO95870 558 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 SCG5P05408 212 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 RNASE1P07998 156 aaKnown RBP12.64□□□□□ -0.39
DDR1-278ENST00000515233 PPIAL4GP0DN37 164 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 IFI30P13284 250 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 KDELR2P33947 212 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 SEC61A1P61619 476 aaKnown RBP12.64□□□□□ -0.39
DDR1-278ENST00000515233 BTG1P62324 171 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 SELENOWP63302 87 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 PAX8Q06710 450 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 TOP3AQ13472 1001 aaPredicted RBP12.64□□□□□ -0.39
DDR1-278ENST00000515233 FHL1Q13642 323 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 BCL6BQ8N143 479 aaPredicted RBP12.64□□□□□ -0.39
DDR1-278ENST00000515233 OR2Z1Q8NG97 314 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 HAVCR1Q96D42 359 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 MAGEB18Q96M61 343 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 ZNF48Q96MX3 618 aaPredicted RBP12.64□□□□□ -0.39
DDR1-278ENST00000515233 DUX5Q96PT3 197 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 POLE4Q9NR33 117 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 INTS9Q9NV88 658 aaKnown RBP12.64□□□□□ -0.39
DDR1-278ENST00000515233 A4GNTQ9UNA3 340 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 PPP1R3CQ9UQK1 317 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 STARD10Q9Y365 291 aa12.64□□□□□ -0.39
DDR1-278ENST00000515233 A0A1W2PPL8 197 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 FXYD1O00168 92 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 SURF4O15260 269 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 WNT2P09544 360 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 IFNA8P32881 189 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 IL13RA1P78552 427 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 SCRN3Q0VDG4 424 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 BAMBIQ13145 260 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 HNRNPA0Q13151 305 aaKnown RBP12.63□□□□□ -0.39
DDR1-278ENST00000515233 ZMYND11Q15326 602 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 TTMPQ5BVD1 217 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 COQ5Q5HYK3 327 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 OAFQ86UD1 273 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 IGFN1Q86VF2 1251 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 OR51A7Q8NH64 312 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 C10orf82Q8WW14 230 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 PTP4A1Q93096 173 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 SLC25A28Q96A46 364 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 CMBLQ96DG6 245 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 PRRC1Q96M27 445 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 COG8Q96MW5 612 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 C1QTNF5Q9BXJ0 243 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 POFUT1Q9H488 388 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 UNKLQ9H9P5 680 aaKnown RBP12.63□□□□□ -0.39
DDR1-278ENST00000515233 IL20RAQ9UHF4 553 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 LRCH1Q9Y2L9 728 aa12.63□□□□□ -0.39
DDR1-278ENST00000515233 TMEM178BH3BS89 294 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 IFNL4K9M1U5 179 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 AHCYL1O43865 530 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 EDF1O60869 148 aaKnown RBP12.62□□□□□ -0.39
DDR1-278ENST00000515233 CD80P33681 288 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 RBMXP38159 391 aaKnown RBP12.62□□□□□ -0.39
DDR1-278ENST00000515233 MDH2P40926 338 aaKnown RBP12.62□□□□□ -0.39
DDR1-278ENST00000515233 SLC9A3P48764 834 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 PAX2Q02962 417 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 PRKCDQ05655 676 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 CYBRD1Q53TN4 286 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 ESCO2Q56NI9 601 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 C9orf139Q6ZV77 190 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 RNF113BQ8IZP6 322 aaKnown RBP12.62□□□□□ -0.39
DDR1-278ENST00000515233 MUC20Q8N307 709 aaPredicted RBP12.62□□□□□ -0.39
DDR1-278ENST00000515233 FAM156AQ8NDB6 213 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 ITLN1Q8WWA0 313 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 MS4A7Q9GZW8 240 aaPredicted RBP12.62□□□□□ -0.39
DDR1-278ENST00000515233 SLITRK2Q9H156 845 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 MRGBPQ9NV56 204 aa12.62□□□□□ -0.39
DDR1-278ENST00000515233 TRAV27A0A087WT01 109 aa12.61□□□□□ -0.39
DDR1-278ENST00000515233 J3QW42 95 aa12.61□□□□□ -0.39
DDR1-278ENST00000515233 SGCEO43556 437 aa12.61□□□□□ -0.39
DDR1-278ENST00000515233 DOK2O60496 412 aa12.61□□□□□ -0.39
DDR1-278ENST00000515233 FSTL3O95633 263 aa12.61□□□□□ -0.39
DDR1-278ENST00000515233 FUT4P22083 530 aa12.61□□□□□ -0.39
DDR1-278ENST00000515233 HTR5AP47898 357 aa12.61□□□□□ -0.39
DDR1-278ENST00000515233 MTNR1AP48039 350 aa12.61□□□□□ -0.39
DDR1-278ENST00000515233 SLC9A3R2Q15599 337 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms