RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 AQP6Q13520 282 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 C11orf71Q6IPW1 123 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 LRRC75A-AS1Q8N1F1 130 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 OR10H5Q8NGA6 315 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 OTULINQ96BN8 352 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 TRMT61AQ96FX7 289 aaKnown RBP12.04□□□□□ -0.48
USP46-209ENST00000514536 CACNG6Q9BXT2 260 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 GSX2Q9BZM3 304 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 NMNAT2Q9BZQ4 307 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 GABARAPL1Q9H0R8 117 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 OR51B6Q9H340 312 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 ZNF442Q9H7R0 627 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 MED20Q9H944 212 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 S100A14Q9HCY8 104 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 MRPL22Q9NWU5 206 aaKnown RBP12.04□□□□□ -0.48
USP46-209ENST00000514536 HIVEP1P15822 2718 aa12.04□□□□□ -0.48
USP46-209ENST00000514536 TVP23AA6NH52 213 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 DOK2O60496 412 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 SNAP29O95721 258 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 PAX1P15863 534 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 SPI1P17947 270 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 GLRXP35754 106 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 ATP5J2P56134 94 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 ESRRGP62508 458 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 ZSCAN26Q16670 478 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 MSMPQ1L6U9 139 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 SWI5Q1ZZU3 235 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 CCDC92Q53HC0 331 aaPredicted RBP12.03□□□□□ -0.48
USP46-209ENST00000514536 KDM4DQ6B0I6 523 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 CORO6Q6QEF8 472 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 PARP8Q8N3A8 854 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 PTP4A1Q93096 173 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 CDADC1Q9BWV3 514 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 HCAR1Q9BXC0 346 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 SLC25A19Q9HC21 320 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 PLEK2Q9NYT0 353 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 TVP23BQ9NYZ1 205 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 CMAHPQ9Y471 501 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 LHFPL6Q9Y693 200 aa12.03□□□□□ -0.48
USP46-209ENST00000514536 USF3Q68DE3 2245 aa12.02□□□□□ -0.48
USP46-209ENST00000514536 PLCE1Q9P212 2302 aa12.02□□□□□ -0.48
USP46-209ENST00000514536 B9A039 149 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 ANKRD65E5RJM6 399 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 SURF4O15260 269 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 COX5BP10606 129 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 ZNF823P16415 610 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 RAD52P43351 418 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 HTR5AP47898 357 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 UCP2P55851 309 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 PTGES3Q15185 160 aaKnown RBP12.02□□□□□ -0.49
USP46-209ENST00000514536 LYPD4Q6UWN0 246 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 VASH1Q7L8A9 365 aaPredicted RBP12.02□□□□□ -0.49
USP46-209ENST00000514536 LINC00346Q8IVM7 164 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 ZNF511Q8NB15 262 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 GJC3Q8NFK1 279 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 PLEKHA8Q96JA3 519 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 OSBPL10Q9BXB5 764 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 TEX12Q9BXU0 123 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 PLK3Q9H4B4 646 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 EIF3KQ9UBQ5 218 aaKnown RBP12.02□□□□□ -0.49
USP46-209ENST00000514536 TMEFF2Q9UIK5 374 aaPredicted RBP12.02□□□□□ -0.49
USP46-209ENST00000514536 FZR1Q9UM11 496 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 PMF1-BGLAPU3KQ54 211 aa12.02□□□□□ -0.49
USP46-209ENST00000514536 TMEM129A0AVI4 362 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 PRR23D1E9PI22 279 aaPredicted RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 SYNGR3O43761 229 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 NDUFS7O75251 213 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 LCKP06239 509 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 PRR23D2P0DMB1 279 aaPredicted RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 BMP4P12644 408 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 PAICSP22234 425 aaKnown RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 IGFBP5P24593 272 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 PCSK6P29122 969 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 EPHA2P29317 976 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 FMO3P31513 532 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 GGT2P36268 569 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 WNT5AP41221 380 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 ERVS71-1P61550 626 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 RPS23P62266 143 aaKnown RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 ADAM8P78325 824 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 EFNB3Q15768 340 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 SHEQ5VZ18 495 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 RGS7BPQ6MZT1 257 aaPredicted RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 PLBD1Q6P4A8 553 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 SPNS3Q6ZMD2 512 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 CPOQ8IVL8 374 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 OR6K6Q8NGW6 343 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 OR2AJ1Q8NGZ0 328 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 OR1F12Q8NHA8 337 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 SLC7A6Q92536 515 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 MRPL24Q96A35 216 aaKnown RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 CIB1Q99828 191 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 OR51V1Q9H2C8 321 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 WDR76Q9H967 626 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 CYB5R1Q9UHQ9 305 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 GDF2Q9UK05 429 aaPredicted RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 NDRG4Q9ULP0 352 aaKnown RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 RTTNQ86VV8 2226 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 BAG2O95816 211 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 POLR2IP36954 125 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms