RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 C3orf36Q3SXR2 165 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 LRRC18Q8N456 261 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 IL17RDQ8NFM7 739 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 OR2AJ1Q8NGZ0 328 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 PTP4A1Q93096 173 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 IL4I1Q96RQ9 567 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 CCL19Q99731 98 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 C1orf198Q9H425 327 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 UGT2A1Q9Y4X1 527 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 TIMM10BQ9Y5J6 103 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 SLC25A15Q9Y619 301 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 DSCAMO60469 2012 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 SEC14L2O76054 403 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 CBR1P16152 277 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 HOXB4P17483 251 aaPredicted RBP17.56■□□□□ 0.4
USP53-208ENST00000514305 NR1H2P55055 460 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 RAB1AP62820 205 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 EFNB1P98172 346 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 TEKQ02763 1124 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 SCRN3Q0VDG4 424 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 SLC25A30Q5SVS4 291 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 SHFQ7M4L6 423 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 WFDC8Q8IUA0 241 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 SKA3Q8IX90 412 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 LRRC75A-AS1Q8N1F1 130 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 NRG4Q8WWG1 115 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 SH3GL3Q99963 347 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 ESRP2Q9H6T0 727 aaKnown RBP17.56■□□□□ 0.4
USP53-208ENST00000514305 CLN6Q9NWW5 311 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.56■□□□□ 0.4
USP53-208ENST00000514305 FREM1Q5H8C1 2179 aa17.56■□□□□ 0.4
USP53-208ENST00000514305 IQCMA0A1B0GVH7 501 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 DCTN6O00399 190 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 INHBBP09529 407 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 GSTT1P30711 240 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 PYCR1P32322 319 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 IL5RAQ01344 420 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 POU4F2Q12837 409 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 AQP6Q13520 282 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 APOFQ13790 326 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 BEX5Q5H9J7 111 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 Q5PR19 223 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 ALKBH2Q6NS38 261 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 TMEM108Q6UXF1 575 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 C20orf204Q6ZNR8 217 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 MEPCEQ7L2J0 689 aaKnown RBP17.55■□□□□ 0.4
USP53-208ENST00000514305 C8orf59Q8N0T1 100 aaPredicted RBP17.55■□□□□ 0.4
USP53-208ENST00000514305 WDR31Q8NA23 367 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 GJC3Q8NFK1 279 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 SLC26A10Q8NG04 563 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 C11orf40Q8WZ69 217 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 NABP1Q96AH0 204 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 TEAD3Q99594 435 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 KCNS3Q9BQ31 491 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 MED20Q9H944 212 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 WARS2Q9UGM6 360 aaKnown RBP17.55■□□□□ 0.4
USP53-208ENST00000514305 ALPK2Q86TB3 2170 aa17.55■□□□□ 0.4
USP53-208ENST00000514305 FAM171A2A8MVW0 826 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 E9PQ18 207 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 DLGAP1O14490 977 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 GYPBP06028 91 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 PTAFRP25105 342 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 CDH11P55287 796 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 ADARB1P78563 741 aaKnown RBP17.54■□□□□ 0.4
USP53-208ENST00000514305 OCLNQ16625 522 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 ZNF691Q5VV52 312 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 KRTAP1-3Q8IUG1 177 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 OR1J2Q8NGS2 313 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 INTS14Q96SY0 518 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 Q9H521 79 aa17.54■□□□□ 0.4
USP53-208ENST00000514305 RAI1Q7Z5J4 1906 aaPredicted RBP17.54■□□□□ 0.4
USP53-208ENST00000514305 ARID1AO14497 2285 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 HLA-HP01893 362 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 GAAP10253 952 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 ATP6V1E1P36543 226 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 ENTPD1P49961 510 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 AQP4P55087 323 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 PIGFQ07326 219 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 TEX30Q5JUR7 227 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 AADACL4Q5VUY2 407 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 IZUMO2Q6UXV1 221 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 OR51L1Q8NGJ5 315 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 RHOXF1Q8NHV9 184 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 RADILQ96JH8 1075 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 MYCBPQ99417 103 aaPredicted RBP17.53■□□□□ 0.4
USP53-208ENST00000514305 ZNF416Q9BWM5 594 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 B3GNT2Q9NY97 397 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 TMEM14AQ9Y6G1 99 aa17.53■□□□□ 0.4
USP53-208ENST00000514305 NAV3Q8IVL0 2385 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 CLUP10909 449 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 HTR1FP30939 366 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 CLEC9AQ6UXN8 241 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 UNQ6126/PRO20091Q6UXV3 157 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.52■□□□□ 0.4
USP53-208ENST00000514305 ENTHD1Q8IYW4 607 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 TFAP2CQ92754 450 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 FOXN4Q96NZ1 517 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 MNTQ99583 582 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 SMR3AQ99954 134 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 HCAR1Q9BXC0 346 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms