RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 P2RY8Q86VZ1 359 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 STX19Q8N4C7 294 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 ACBD7Q8N6N7 88 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 WDR31Q8NA23 367 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 STEAP2Q8NFT2 490 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 OR10H4Q8NGA5 316 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 OR2AJ1Q8NGZ0 328 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 FGFBP3Q8TAT2 258 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 ST7LQ8TDW4 575 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 RNASE6Q93091 150 aaKnown RBP10.95□□□□□ -0.66
PDPN-210ENST00000513143 ZNF649Q9BS31 505 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 ABHD6Q9BV23 337 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 C1orf198Q9H425 327 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 ZNF696Q9H7X3 374 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 OBP2BQ9NPH6 170 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 INPP5EQ9NRR6 644 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 B3GNT2Q9NY97 397 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 ERVK-18Q9QC07 812 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 GDF2Q9UK05 429 aaPredicted RBP10.95□□□□□ -0.66
PDPN-210ENST00000513143 COPS3Q9UNS2 423 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 KLHDC2Q9Y2U9 406 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 TIMM10BQ9Y5J6 103 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 PRR14LQ5THK1 2151 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 RTTNQ86VV8 2226 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 DAPL1A0PJW8 107 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 ZNF503-AS2A6NEH8 195 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 WIPF3A6NGB9 483 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 ZNF670-ZNF695F2Z2N8 137 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 PHYHO14832 338 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 RGS10O43665 173 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 MRPS14O60783 128 aaKnown RBP10.94□□□□□ -0.66
PDPN-210ENST00000513143 HLA-HP01893 362 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 LYNP07948 512 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 HTR1AP08908 422 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 PATE4P0C8F1 98 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 PLA2G2AP14555 144 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 ZNF32P17041 273 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 EEF1B2P24534 225 aaKnown RBP10.94□□□□□ -0.66
PDPN-210ENST00000513143 CCKARP32238 428 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 UBE2NP61088 152 aaKnown RBP10.94□□□□□ -0.66
PDPN-210ENST00000513143 ZNF85Q03923 595 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 PIGFQ07326 219 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 TFF3Q07654 80 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 EIF2B1Q14232 305 aaKnown RBP10.94□□□□□ -0.66
PDPN-210ENST00000513143 TIMM23BQ5SRD1 257 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 RNLSQ5VYX0 342 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 CFAP77Q6ZQR2 320 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 SSX6Q7RTT6 188 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 PRSS48Q7RTY5 328 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 DCXRQ7Z4W1 244 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 RFLNBQ8N5W9 214 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 GJC3Q8NFK1 279 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 THEM6Q8WUY1 208 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 ASB17Q8WXJ9 295 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 NANOS1Q8WY41 292 aaKnown RBP10.94□□□□□ -0.66
PDPN-210ENST00000513143 S100PBPQ96BU1 408 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 LRRC46Q96FV0 321 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 MAP6Q96JE9 813 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 AMELYQ99218 206 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 TBX5Q99593 518 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 ACTR6Q9GZN1 396 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 ERVK13-1Q9NX77 482 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 LAMP5Q9UJQ1 280 aa10.94□□□□□ -0.66
PDPN-210ENST00000513143 EXOSC1Q9Y3B2 195 aaKnown RBP10.94□□□□□ -0.66
PDPN-210ENST00000513143 RER1O15258 196 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 LIMS3P0CW19 117 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 LIMS4P0CW20 117 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 CD79AP11912 226 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 MYL12AP19105 171 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 HOXC12P31275 282 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 ARR3P36575 388 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 CAPZA2P47755 286 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 ETV1P50549 477 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 CDH15P55291 814 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 RAB1AP62820 205 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 TUBA1BP68363 451 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 TUBA4AP68366 448 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 PSG4Q00888 419 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 SCRN3Q0VDG4 424 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 GALEQ14376 348 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 IRF3Q14653 427 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 CCDC92Q53HC0 331 aaPredicted RBP10.93□□□□□ -0.66
PDPN-210ENST00000513143 ZNF684Q5T5D7 378 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 TMEM53Q6P2H8 277 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 TUBA1AQ71U36 451 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 RHOUQ7L0Q8 258 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 LHFPL3Q86UP9 236 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 OR10S1Q8NGN2 331 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 OR52N5Q8NH56 324 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 RNF133Q8WVZ7 376 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 CDCA4Q9BXL8 241 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 OR2H1Q9GZK4 316 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 WNT5BQ9H1J7 359 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 RNF121Q9H920 327 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 NOX3Q9HBY0 568 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 PNRC2Q9NPJ4 139 aaKnown RBP10.93□□□□□ -0.66
PDPN-210ENST00000513143 AMDHD2Q9Y303 409 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 SLC25A15Q9Y619 301 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
PDPN-210ENST00000513143 UBR5O95071 2799 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms