RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CSRP3P50461 194 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 OR4D2P58180 307 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 RPS15AP62244 130 aaKnown RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 ARG2P78540 354 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 BDH1Q02338 343 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 OC90Q02509 493 aaPredicted RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 CAV1Q03135 178 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 RGS1Q08116 209 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 ZP4Q12836 540 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 DDX39BQ13838 428 aaKnown RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 NSDHLQ15738 373 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 ZKSCAN8Q15776 578 aaPredicted RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 C17orf58Q2M2W7 97 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 DEFB134Q4QY38 66 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 ZNF311Q5JNZ3 666 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 LINC00242Q5T6M2 205 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 FHL5Q5TD97 284 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 LGSNQ5TDP6 509 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 DUPD1Q68J44 220 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 TTC19Q6DKK2 380 aaPredicted RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 PRMT9Q6P2P2 845 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 BTNL3Q6UXE8 466 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 C2orf66Q6UXQ4 117 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 ADAMTSL5Q6ZMM2 481 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 CTAGE6Q86UF2 777 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 PAQR7Q86WK9 346 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 ZNF491Q8N8L2 437 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 ZSCAN4Q8NAM6 433 aaPredicted RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 CATSPER1Q8NEC5 780 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 MNS1Q8NEH6 495 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 OR52B4Q8NGK2 314 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 OR2Y1Q8NGV0 311 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 OR51Q1Q8NH59 317 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 FLVCR1-AS1Q8TAF5 88 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 C19orf60Q96EN9 201 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 VSTM2LQ96N03 204 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 CYTH2Q99418 400 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 AIF1LQ9BQI0 150 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 RHOXF2Q9BQY4 288 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 NUDT9Q9BW91 350 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 DRC3Q9H069 523 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 RPS10P5Q9NQ39 176 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 PNO1Q9NRX1 252 aaKnown RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 FARSBQ9NSD9 589 aaKnown RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 CLEC5AQ9NY25 188 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 CTSFQ9UBX1 484 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 MTRF1LQ9UGC7 380 aaKnown RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 NXT1Q9UKK6 140 aaKnown RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 ACOT9Q9Y305 439 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 NAALAD2Q9Y3Q0 740 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 KNL1Q8NG31 2342 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 FRYLO94915 3013 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 SPTBN2O15020 2390 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 WDR87Q6ZQQ6 2873 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 CACNA1BQ00975 2339 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 GOLGA4Q13439 2230 aaKnown RBP3.26□□□□□ -1.89
HTT-210ENST00000512909 CABIN1Q9Y6J0 2220 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 IDSB3KWA1 339 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 EIF3HO15372 352 aaKnown RBP eCLIP3.26□□□□□ -1.892e-7■■□□□ 13.2
HTT-210ENST00000512909 RDH16O75452 317 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 STX11O75558 287 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 STK16O75716 305 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 KLF7O75840 302 aaPredicted RBP3.26□□□□□ -1.89
HTT-210ENST00000512909 MFN2O95140 757 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 C1GALT1C1LP0DN25 315 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 ICAM2P13598 275 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 GFAPP14136 432 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 IMPA1P29218 277 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 CRABP2P29373 138 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 XCR1P46094 333 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 RAP1GDS1P52306 607 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 SLC25A1P53007 311 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 PLA2G16P53816 162 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 AP1S2P56377 157 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 STXBP1P61764 594 aaKnown RBP3.26□□□□□ -1.89
HTT-210ENST00000512909 TBPL1P62380 186 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 SKP1P63208 163 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 CSNK1G2P78368 415 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 BTG2P78543 158 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 IRF8Q02556 426 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 ZNF85Q03923 595 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 ZNF33BQ06732 778 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 IL18R1Q13478 541 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 TSNQ15631 228 aaKnown RBP3.26□□□□□ -1.89
HTT-210ENST00000512909 TRIP10Q15642 601 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 LTB4RQ15722 352 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 WHAMMP3Q1A5X7 153 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 GSG1Q2KHT4 349 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 SFT2D3Q587I9 215 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 BAIAP2L2Q6UXY1 529 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 ZNF562Q6V9R5 426 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 ABHD13Q7L211 337 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 NDUFAF7Q7L592 441 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 PRSS41Q7RTY9 318 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 HPS6Q86YV9 775 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 IFT20Q8IY31 132 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 CENPLQ8N0S6 344 aaPredicted RBP3.26□□□□□ -1.89
HTT-210ENST00000512909 IQCKQ8N0W5 287 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 MTURNQ8N3F0 131 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms