RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CBLN4Q9NTU7 201 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 FAM120CQ9NX05 1096 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 CNOT2Q9NZN8 540 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 BCAP29Q9UHQ4 241 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 GLS2Q9UI32 602 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 ZNF490Q9ULM2 529 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 TP53TG3Q9ULZ0 132 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 STAP1Q9ULZ2 295 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 ALPK2Q86TB3 2170 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 KIAA1549Q9HCM3 1950 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 A0A1W2PNV4 684 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 F8WDY8 70 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 UBXN8O00124 270 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 EI24O14681 340 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 UGT1A9O60656 530 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 TSC22D2O75157 780 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ERLIN1O75477 346 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 TNFSF13O75888 250 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 AKR7A3O95154 331 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ECDO95905 644 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 GOT2P00505 430 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 AK1P00568 194 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 KRT8P05787 483 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 MSMBP08118 114 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 GSTA1P08263 222 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 TACSTD2P09758 323 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 PRG2P13727 222 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 NCF1P14598 390 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 TBXA2RP21731 343 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 IL2RGP31785 369 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 SOX6P35712 828 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 SLC7A2P52569 658 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 MYBPC1Q00872 1141 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 PDZK1IP1Q13113 114 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ABRAXAS2Q15018 415 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ZKSCAN8Q15776 578 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 PARP15Q460N3 678 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 AGKQ53H12 422 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ARMC12Q5T9G4 340 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 LIPKQ5VXJ0 399 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 RNLSQ5VYX0 342 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 FAM219BQ5XKK7 198 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 PDPK2PQ6A1A2 396 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 C11orf71Q6IPW1 123 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 FAHD2BQ6P2I3 314 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ATRAIDQ6UW56 229 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 Q6ZR54 194 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 CCDC73Q6ZRK6 1079 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ANKRD37Q7Z713 158 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 RANBP3LQ86VV4 465 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 C12orf56Q8IXR9 622 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 PYROXD2Q8N2H3 581 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 LINC00612Q8N6U2 182 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ZNF397Q8NF99 534 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 TYMSOSQ8TAI1 123 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 C22orf15Q8WYQ4 148 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 DTNBP1Q96EV8 351 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 FAHD2AQ96GK7 314 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 SLC30A2Q9BRI3 323 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ZSCAN5AQ9BUG6 496 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 FICDQ9BVA6 458 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 CARD6Q9BX69 1037 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 SPATA16Q9BXB7 569 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 TMEM231Q9H6L2 316 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 UGT1A7Q9HAW7 530 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 ADGRL4Q9HBW9 690 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 AMBNQ9NP70 447 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 CENPMQ9NSP4 180 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 QPCTLQ9NXS2 382 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 LAMP5Q9UJQ1 280 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 RNF24Q9Y225 148 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 SLC9A8Q9Y2E8 581 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 EXPH5Q8NEV8 1989 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 NCKAP5O14513 1909 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 PRR14LQ5THK1 2151 aa2.66□□□□□ -1.98
TOPBP1-208ENST00000511439 STARD9Q9P2P6 4700 aa2.65□□□□□ -1.98
TOPBP1-208ENST00000511439 IGHV3OR16-12A0A075B7B8 117 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 A0A087WZY1 265 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 WI2-2373I1.2A0A1W2PRP0 233 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF487B1APH4 448 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 G3V3Y1 287 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 GOLGA8MH3BSY2 632 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 PDLIM1O00151 329 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 AP3B1O00203 1094 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 CFLARO15519 480 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 TYROBPO43914 113 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 GMFGO60234 142 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 SRPX2O60687 465 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 MTX2O75431 263 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 CLPXO76031 633 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 LY6HO94772 140 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 KBTBD11O94819 623 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 NDUFA7O95182 113 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 NUDT14O95848 222 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 CRHP06850 196 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 SNRPCP09234 159 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 PAEPP09466 180 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 ZCCHC18P0CG32 403 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 RBMY1CP0DJD4 496 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms