RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 IGHV1-18A0A0C4DH31 117 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 hCG_2039718K7EN88 272 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 KERAO60938 352 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 NDUFA7O95182 113 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 IFNB1P01574 187 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 GBAP04062 536 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 GYPCP04921 128 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 PORP16435 677 aaPredicted RBP4.92□□□□□ -1.62
USP53-206ENST00000510737 IL12BP29460 328 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 MELKQ14680 651 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 RNF212Q495C1 297 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 FBXO48Q5FWF7 155 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 ZNF311Q5JNZ3 666 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 CASC10Q5T4H9 136 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 LINC01006Q8NI28 216 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 CPNE4Q96A23 557 aaPredicted RBP4.92□□□□□ -1.62
USP53-206ENST00000510737 MTERF3Q96E29 417 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 CMTM7Q96FZ5 175 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 PDLIM5Q96HC4 596 aaKnown RBP4.92□□□□□ -1.62
USP53-206ENST00000510737 RNF145Q96MT1 663 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 TPK1Q9H3S4 243 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 ZNF665Q9H7R5 613 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 ZNF275Q9NSD4 429 aaPredicted RBP4.92□□□□□ -1.62
USP53-206ENST00000510737 TAS2R16Q9NYV7 291 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 PRODH2Q9UF12 536 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 CES1P1Q9UKY3 287 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 PPP2R2CQ9Y2T4 447 aa4.92□□□□□ -1.62
USP53-206ENST00000510737 MDFIC2A0A1B0GVS7 189 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 SDR42E2A6NKP2 422 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 A8MZ25 164 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 CCDC188H7C350 402 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 PDLIM1O00151 329 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 PPIHO43447 177 aaKnown RBP4.91□□□□□ -1.62
USP53-206ENST00000510737 RP2O75695 350 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 ANGPTL1O95841 491 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 ATP1B1P05026 303 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 ERCC1P07992 297 aaPredicted RBP4.91□□□□□ -1.62
USP53-206ENST00000510737 TCN1P20061 433 aaPredicted RBP4.91□□□□□ -1.62
USP53-206ENST00000510737 ACHEP22303 614 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 SFTPDP35247 375 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 KRT20P35900 424 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 CAMPP49913 170 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 HNMTP50135 292 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 NAP1L1P55209 391 aaKnown RBP4.91□□□□□ -1.62
USP53-206ENST00000510737 RWDD2BP57060 319 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 CDKL1Q00532 357 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 C17orf67Q0P5P2 114 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 CHIT1Q13231 466 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 LTB4RQ15722 352 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 DEFB121Q5J5C9 76 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 HIST2H2AA3Q6FI13 130 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 OR52E8Q6IFG1 317 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 FAM180BQ6P0A1 224 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 LRRC70Q7Z2Q7 622 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 SPATA21Q7Z572 469 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 ZNF100Q8IYN0 542 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 CDK20Q8IZL9 346 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 UBE2J2Q8N2K1 259 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 SLC43A2Q8N370 569 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 NOA1Q8NC60 698 aaKnown RBP4.91□□□□□ -1.62
USP53-206ENST00000510737 DEFB108BQ8NET1 73 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 OR7G3Q8NG95 312 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 OR10G8Q8NGN5 311 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 RDH5Q92781 318 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 ZNF486Q96H40 463 aaPredicted RBP4.91□□□□□ -1.62
USP53-206ENST00000510737 VSTM2LQ96N03 204 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 EFCAB11Q9BUY7 163 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 WDR41Q9HAD4 459 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 GNB4Q9HAV0 340 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 TIGARQ9NQ88 270 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 SLC17A5Q9NRA2 495 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 TNFRSF19Q9NS68 423 aa4.91□□□□□ -1.62
USP53-206ENST00000510737 A0A087WZY1 265 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 ZNF724A8MTY0 619 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 AP3B1O00203 1094 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 CYTIPO60759 359 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 TTC4O95801 387 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 CRYBA1P05813 215 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 NPR2P20594 1047 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 CALCRP30988 508 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 SLC1A3P43003 542 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 RAP1GDS1P52306 607 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 ARFIP1P53367 373 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 GPX6P59796 221 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 SARNPP82979 210 aaKnown RBP4.9□□□□□ -1.63
USP53-206ENST00000510737 IRF8Q02556 426 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 PLPPR5Q32ZL2 321 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 MOGAT2Q3SYC2 334 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 TMEM176BQ3YBM2 270 aaPredicted RBP4.9□□□□□ -1.63
USP53-206ENST00000510737 HSP90AA5PQ58FG0 334 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 PAGE2BQ5JRK9 111 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 AVPI1Q5T686 147 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 C6orf163Q5TEZ5 329 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 C9orf135Q5VTT2 229 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 C11orf63Q6NUN7 778 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 MED27Q6P2C8 311 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 RBM43Q6ZSC3 357 aaKnown RBP4.9□□□□□ -1.63
USP53-206ENST00000510737 WDFY1Q8IWB7 410 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 AQP11Q8NBQ7 271 aa4.9□□□□□ -1.63
USP53-206ENST00000510737 OR52E4Q8NGH9 312 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms