RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 USP42Q9H9J4 1324 aaKnown RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 A0A1B0GTI1 187 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 SH3PXD2BA1X283 911 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 FABP12A6NFH5 140 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 ERVV-1B6SEH8 477 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 TRIM49D1C9J1S8 452 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 CLOCKO15516 846 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 ZMPSTE24O75844 475 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 NUDT14O95848 222 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 EPOP01588 193 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 FABP1P07148 127 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 KRT16P08779 473 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 OR4E1P0C645 316 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 PSKH1P11801 424 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 PVRP15151 417 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 M6PRP20645 277 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 S100A1P23297 94 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 GTF2E2P29084 291 aaKnown RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 MAS1LP35410 378 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 UGT1A5P35504 534 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 GYG1P46976 350 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 GNG10P50151 68 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 CCR8P51685 355 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 RAP1GDS1P52306 607 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 PSMD4P55036 377 aaKnown RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 PLP1P60201 277 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 ATP6V0D1P61421 351 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 IL9RQ01113 521 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 OGDHQ02218 1023 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 SCRN3Q0VDG4 424 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 ORC2Q13416 577 aaPredicted RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 MED21Q13503 144 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 NAB1Q13506 487 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 EXOSC2Q13868 293 aaKnown RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 GK3PQ14409 553 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 PDK2Q15119 407 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 TSC22D1Q15714 1073 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 NDUFAF6Q330K2 333 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 ZNF528Q3MIS6 628 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 GLYR1Q49A26 553 aaPredicted RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 ACTBL2Q562R1 376 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 SEL1L2Q5TEA6 688 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 GPR107Q5VW38 600 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 STUMQ69YW2 141 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 OR52W1Q6IF63 320 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 HDDC2Q7Z4H3 204 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 SERPINA9Q86WD7 417 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 ZNF100Q8IYN0 542 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 CMTM8Q8IZV2 173 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 OR5AU1Q8NGC0 362 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 OR5D18Q8NGL1 313 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 OR4D5Q8NGN0 318 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 NUBPLQ8TB37 319 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 TMEM239Q8WW34 195 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 LZICQ8WZA0 190 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 FAM131CQ96AQ9 280 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 BIRC7Q96CA5 298 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 C10orf35Q96D05 121 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 CPB2Q96IY4 423 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 DNAJC1Q96KC8 554 aaKnown RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 AMDHD1Q96NU7 426 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 CSPG4P5Q96PW8 444 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 COPS8Q99627 209 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 AGPAT1Q99943 283 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 DUSP16Q9BY84 665 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 NMUR2Q9GZQ4 415 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 PARVBQ9HBI1 364 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 POLE4Q9NR33 117 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 C19orf12Q9NSK7 152 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 TECRQ9NZ01 308 aaKnown RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 LHX3Q9UBR4 397 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 MRM2Q9UI43 246 aaKnown RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 C3orf18Q9UK00 162 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 KLK12Q9UKR0 248 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 EMCNQ9ULC0 261 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 HYOU1Q9Y4L1 999 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 KPTNQ9Y664 436 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 TNS1Q9HBL0 1735 aaKnown RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 TRPM3Q9HCF6 1732 aaPredicted RBP3.01□□□□□ -1.93
NUP54-209ENST00000510569 LRP5O75197 1615 aa3.01□□□□□ -1.93
NUP54-209ENST00000510569 RPAP1Q9BWH6 1393 aaPredicted RBP3□□□□□ -1.93
NUP54-209ENST00000510569 WNK3Q9BYP7 1800 aa3□□□□□ -1.93
NUP54-209ENST00000510569 LTN1O94822 1766 aa3□□□□□ -1.93
NUP54-209ENST00000510569 KBTBD11-OT1A0A1B0GTJ5 212 aa3□□□□□ -1.93
NUP54-209ENST00000510569 FUOMA2VDF0 154 aa3□□□□□ -1.93
NUP54-209ENST00000510569 TMEM114B3SHH9 223 aa3□□□□□ -1.93
NUP54-209ENST00000510569 NPIPA7E9PJI5 369 aa3□□□□□ -1.93
NUP54-209ENST00000510569 SMLR1H3BR10 107 aa3□□□□□ -1.93
NUP54-209ENST00000510569 H3BTX0 84 aa3□□□□□ -1.93
NUP54-209ENST00000510569 RFXANKO14593 260 aa3□□□□□ -1.93
NUP54-209ENST00000510569 SNAI2O43623 268 aa3□□□□□ -1.93
NUP54-209ENST00000510569 GMDSO60547 372 aa3□□□□□ -1.93
NUP54-209ENST00000510569 TSPAN2O60636 221 aa3□□□□□ -1.93
NUP54-209ENST00000510569 TNNC2P02585 160 aa3□□□□□ -1.93
NUP54-209ENST00000510569 UBCP0CG48 685 aaKnown RBP3□□□□□ -1.93
NUP54-209ENST00000510569 NPIPA8P0DM63 369 aa3□□□□□ -1.93
NUP54-209ENST00000510569 CT45A10P0DMU9 189 aa3□□□□□ -1.93
NUP54-209ENST00000510569 ATP1B2P14415 290 aaPredicted RBP3□□□□□ -1.93
NUP54-209ENST00000510569 UQCRBP14927 111 aa3□□□□□ -1.93
NUP54-209ENST00000510569 CBR1P16152 277 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms