RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 NPRL2Q8WTW4 380 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 PYDC1Q8WXC3 89 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 PSMG2Q969U7 264 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 FAM131CQ96AQ9 280 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 ZNF707Q96C28 371 aaPredicted RBP1.81□□□□□ -2.12
PDE4D-218ENST00000509368 FRMD8P1Q9BZ68 369 aaPredicted RBP1.81□□□□□ -2.12
PDE4D-218ENST00000509368 PXMP2Q9NR77 195 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 PLCXD1Q9NUJ7 323 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 TXLNGQ9NUQ3 528 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 NUDT4Q9NZJ9 180 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 TMEM181Q9P2C4 612 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 SPRR3Q9UBC9 169 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 SLC22A14Q9Y267 594 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 FBXO7Q9Y3I1 522 aa1.81□□□□□ -2.12
PDE4D-218ENST00000509368 EYSQ5T1H1 3165 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 NAV1Q8NEY1 1877 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 A0A1B0GTH9 108 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 A6NDN8 102 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CENPXA8MT69 81 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 RGS16O15492 202 aaPredicted RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 XRCC2O43543 280 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 TRAPPC3O43617 180 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 SNAP91O60641 907 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 MAGEC1O60732 1142 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 GJB5O95377 273 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 DEXIO95424 95 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 C1orf105O95561 183 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 TIMP1P01033 207 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 IFNA14P01570 189 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 IGHV2-5P01817 119 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 HPNP05981 417 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CYBAP13498 195 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CBR1P16152 277 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 BGNP21810 368 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 FASP25445 335 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 AK4P27144 223 aaPredicted RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CRABP2P29373 138 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 LEPP41159 167 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CSKP41240 450 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 RAP1GDS1P52306 607 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 FOXG1P55316 489 aaPredicted RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 ERVFC1-1P60608 527 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 LMO4P61968 165 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 LRRC63Q05C16 580 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 TSPAN31Q12999 210 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CAPRIN1Q14444 709 aaKnown RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 NECTIN1Q15223 517 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 C18orf21Q32NC0 220 aaPredicted RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 NDUFAF6Q330K2 333 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 TEX30Q5JUR7 227 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 FFAR4Q5NUL3 377 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 SAMD4BQ5PRF9 694 aaKnown RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 VAX1Q5SQQ9 334 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 PWWP2BQ6NUJ5 590 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 LHFPL3Q86UP9 236 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CATSPER3Q86XQ3 398 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 SLC13A5Q86YT5 568 aaPredicted RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 LRRC34Q8IZ02 419 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CMTM8Q8IZV2 173 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 SLC39A11Q8N1S5 342 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CSNK1A1LQ8N752 337 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 FBXL13Q8NEE6 735 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CCDC112Q8NEF3 446 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 OR8J2Q8NGG1 315 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.8□□□□□ -2.122e-7■■■■■ 62.8
PDE4D-218ENST00000509368 MRGPRFQ96AM1 343 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CCDC124Q96CT7 223 aaKnown RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 PAGE5Q96GU1 130 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 OXGR1Q96P68 337 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 DUX3Q96PT4 197 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 MCCC1Q96RQ3 725 aaPredicted RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 HIST1H4GQ99525 98 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CHID1Q9BWS9 393 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 SLC38A10Q9HBR0 1119 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 BATF3Q9NR55 127 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 C19orf12Q9NSK7 152 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 AHSPQ9NZD4 102 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 LGALS13Q9UHV8 139 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 KIF25Q9UIL4 384 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 RIMS3Q9UJD0 308 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 FLVCR2Q9UPI3 526 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 MMP24Q9Y5R2 645 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CDH10Q9Y6N8 788 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 ZBED9Q6R2W3 1325 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 LAMA2P24043 3122 aaKnown RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 A0A1W2PRF3 423 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 A0A1W2PRM7 423 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CCL21O00585 134 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 HSBP1O75506 76 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CLPXO76031 633 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 VAPBO95292 243 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 FARS2O95363 451 aaKnown RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 NTN1O95631 604 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 OXSR1O95747 527 aaPredicted RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 IGLV1-44P01699 117 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 ALPLP05186 524 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 GLAP06280 429 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 ZDHHC11BP0C7U3 371 aa1.8□□□□□ -2.12
PDE4D-218ENST00000509368 UBCP0CG48 685 aaKnown RBP1.8□□□□□ -2.12
PDE4D-218ENST00000509368 CCDC166P0CW27 439 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms