RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TTKP33981 857 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 HTR5AP47898 357 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 RGS6P49758 472 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 CDC42P60953 191 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 SNRPD2P62316 118 aaKnown RBP7.92□□□□□ -1.14
NUP54-207ENST00000508583 ADAM8P78325 824 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 PSG4Q00888 419 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 SPOCK1Q08629 439 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 SNTB2Q13425 540 aaKnown RBP7.92□□□□□ -1.14
NUP54-207ENST00000508583 RAB35Q15286 201 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 RCN1Q15293 331 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 MOGQ16653 247 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 ZNF362Q5T0B9 420 aaPredicted RBP7.92□□□□□ -1.14
NUP54-207ENST00000508583 SLX4IPQ5VYV7 408 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 ZBTB49Q6ZSB9 765 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 SHFQ7M4L6 423 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 DTX2Q86UW9 622 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 GID4Q8IVV7 300 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 TRMT61AQ96FX7 289 aaKnown RBP7.92□□□□□ -1.14
NUP54-207ENST00000508583 ZNF75AQ96N20 296 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 DCLRE1CQ96SD1 692 aaKnown RBP7.92□□□□□ -1.14
NUP54-207ENST00000508583 DDOQ99489 341 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 NMNAT2Q9BZQ4 307 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 RIBC2Q9H4K1 309 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 DCLRE1BQ9H816 532 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 EMC7Q9NPA0 242 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 IMPAD1Q9NX62 359 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 TVP23BQ9NYZ1 205 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 PLEKHA6Q9Y2H5 1048 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 CMAHPQ9Y471 501 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 PMF1-BGLAPU3KQ54 211 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 MAST4O15021 2626 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 A0A1W2PPR1 153 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 C5orf49A4QMS7 147 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 SLC22A31A6NKX4 558 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 SNTNA6NMZ2 147 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 B9A039 149 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 E7EQL1 145 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 DCTN6O00399 190 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 ABHD16AO95870 558 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 CD53P19397 219 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 CCNOP22674 350 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 APEX1P27695 318 aaKnown RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 GSTT1P30711 240 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 CALCRP30988 508 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 PYCR1P32322 319 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 GLRXP35754 106 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 SERPINF1P36955 418 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 SLC15A1P46059 708 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 EVX1P49640 407 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 ENTPD1P49961 510 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 RPS7P62081 194 aaKnown RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 TRIP10Q15642 601 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 EFNB3Q15768 340 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 DEFB113Q30KQ7 82 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 KLHL12Q53G59 568 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 TEX30Q5JUR7 227 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 ELFN2Q5R3F8 820 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 KRT80Q6KB66 452 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 RGS7BPQ6MZT1 257 aaPredicted RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 ACSM5Q6NUN0 579 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 PLBD1Q6P4A8 553 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 RHOUQ7L0Q8 258 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 VASH1Q7L8A9 365 aaPredicted RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 CXXC5Q7LFL8 322 aaKnown RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 ZNF584Q8IVC4 421 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 LRRC75A-AS1Q8N1F1 130 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 CBR4Q8N4T8 237 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 PACRGLQ8N7B6 248 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 ZNF454Q8N9F8 522 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 OR9Q1Q8NGQ5 310 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 OR1F12Q8NHA8 337 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 AKR7LQ8NHP1 331 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 TRUB1Q8WWH5 349 aaKnown RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 NRGNQ92686 78 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 HTRA1Q92743 480 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 RFKQ969G6 155 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 INTS14Q96SY0 518 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 PITX2Q99697 317 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 COQ7Q99807 217 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 FOXC2Q99958 501 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 WNT5BQ9H1J7 359 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 OR51V1Q9H2C8 321 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 BARX1Q9HBU1 254 aaPredicted RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 CYB5R1Q9UHQ9 305 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 TMEFF2Q9UIK5 374 aaPredicted RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 GDF2Q9UK05 429 aaPredicted RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 LAMP3Q9UQV4 416 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 COMMD3-BMI1R4GMX3 469 aa7.91□□□□□ -1.14
NUP54-207ENST00000508583 RAI1Q7Z5J4 1906 aaPredicted RBP7.91□□□□□ -1.14
NUP54-207ENST00000508583 FAM183AA6NL82 134 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 FAM171A2A8MVW0 826 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 MPZL2O60487 215 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 ICMTO60725 284 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 MITFO75030 526 aaPredicted RBP7.9□□□□□ -1.14
NUP54-207ENST00000508583 MPZL1O95297 269 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 APOC1P02654 83 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 TFP02787 698 aa7.9□□□□□ -1.14
NUP54-207ENST00000508583 MT-ND5P03915 603 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms