RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 MIB2Q96AX9 1013 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 BPIFA2Q96DR5 249 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 OR2M4Q96R27 311 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 DIRC2Q96SL1 478 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 GPR62Q9BZJ7 368 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 BCO1Q9HAY6 547 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC22A13Q9Y226 551 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 QSER1Q2KHR3 1735 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 LOC285556D6RIA3 1793 aa6.57□□□□□ -1.36
LIMCH1-207ENST00000508466 PHIPQ8WWQ0 1821 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 K7ESM1 405 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 BHLHE40O14503 412 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 GLCEO94923 617 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 APBA3O96018 575 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CD14P08571 375 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 FCGR3AP08637 254 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 THPOP40225 353 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 SSR2P43308 183 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CSNK1EP49674 416 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 SPOCK1Q08629 439 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 PDE7AQ13946 482 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 NNATQ16517 81 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CDKN3Q16667 212 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ARSIQ5FYB1 569 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CD300LDQ6UXZ3 194 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CHRDL2Q6WN34 429 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 Q6ZVU0 165 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 PRR18Q8N4B5 295 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 C19orf47Q8N9M1 422 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 OR56A3Q8NH54 315 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 OR5P2Q8WZ92 322 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 OR10C1Q96KK4 312 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 OR7D2Q96RA2 312 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 S100A13Q99584 98 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 DDA1Q9BW61 102 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 C1QTNF2Q9BXJ5 285 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 OR2AG1Q9H205 316 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 SH3BGRL3Q9H299 93 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 TM7SF3Q9NS93 570 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 PADI3Q9ULW8 664 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ZSWIM8A7E2V4 1837 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 PATJQ8NI35 1801 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 DNAJC25-GNG10A0A024R161 153 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 TRAV1-2A0A0B4J238 106 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF736B4DX44 427 aaPredicted RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 SDCBPO00560 298 aaPredicted RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CTDSPLO15194 276 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 DNAJB6O75190 326 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 STC2O76061 302 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CYB5AP00167 134 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 FOLR2P14207 255 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CD70P32970 193 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 TAGLN2P37802 199 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 GUK1Q16774 197 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CHST9Q7L1S5 443 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 MDGA2Q7Z553 956 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CAMKMTQ7Z624 323 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF679Q8IYX0 411 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ABHD5Q8WTS1 349 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 SETD7Q8WTS6 366 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 TSEN15Q8WW01 171 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CNRIP1Q96F85 164 aaPredicted RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 KXD1Q9BQD3 176 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 TRIM62Q9BVG3 475 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 MYNNQ9NPC7 610 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 RNF24Q9Y225 148 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 A0A0A6YYH2 397 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 OR5H15A6NDH6 313 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 MYADML2A6NDP7 307 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 A6NJ64 397 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 OR5H1A6NKK0 313 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC22A31A6NKX4 558 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 DUXAA6NLW8 204 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 A8MWP6 167 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 GRXCR1A8MXD5 290 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 AHSA1O95433 338 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 PMS2P2O95744 297 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 KNG1P01042 644 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 SELEP16581 610 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 PPP1CCP36873 323 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 WNT5AP41221 380 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 METAP1P53582 386 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF280AP59817 542 aaPredicted RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 SMAD3P84022 425 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 NHLH2Q02577 135 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 BIKQ13323 160 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 MESTQ5EB52 335 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 WDR25Q64LD2 544 aaPredicted RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 MRPL10Q7Z7H8 261 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 FJX1Q86VR8 437 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 TMEM173Q86WV6 379 aaPredicted RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 GID4Q8IVV7 300 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 C10orf53Q8N6V4 93 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF610Q8N9Z0 462 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 CLEC1AQ8NC01 280 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 OR51A2Q8NGJ7 313 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ASB17Q8WXJ9 295 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 SEH1LQ96EE3 360 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ADAD1Q96M93 576 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 MENTQ9BUN1 341 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms