RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 CDHR4A6H8M9 788 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 PGPEP1LA6NFU8 196 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 FAAHO00519 579 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 OR1I1O60431 355 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 PMS2P2O95744 297 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TSPAN13O95857 204 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 SLC16A8O95907 504 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TRGC2P03986 189 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 OR5G3P0C626 314 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 OR10J4P0C629 311 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 LINC00032P0C843 101 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 PGA3P0DJD8 388 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 FAUP35544 74 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 GAS1P54826 345 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 WNT3AP56704 352 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 RAB11AP62491 216 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 CCL7P80098 99 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 SLC6A3Q01959 620 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 HYAL4Q2M3T9 481 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 MPPE1Q53F39 396 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 KIAA1211LQ6NV74 962 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TMPRSS11BQ86T26 416 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 BATF2Q8N1L9 274 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 C2CD4AQ8NCU7 369 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 LINC00116Q8NCU8 138 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 OR14K1Q8NGZ2 314 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 JOSD2Q8TAC2 188 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 ASB5Q8WWX0 329 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 CACNG8Q8WXS5 425 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TMEM176AQ96HP8 235 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 SLC41A2Q96JW4 573 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 HSH2DQ96JZ2 352 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 POM121L2Q96KW2 1035 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 BOCQ9BWV1 1114 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 SLC17A9Q9BYT1 436 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 PKIBQ9C010 78 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 ZNF552Q9H707 407 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 NRIP3Q9NQ35 241 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 RCE1Q9Y256 329 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 YBX2Q9Y2T7 364 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 AMDHD2Q9Y303 409 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 FRMPD3Q5JV73 1810 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TRBV24-1A0A075B6N3 115 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 A0A0G2JK05 382 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 C17orf105B2RV13 164 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 ZIC2O95409 532 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 ZNF682O95780 498 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TXNDC12O95881 172 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 ATP1B1P05026 303 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 HNRNPA1P09651 372 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 ELFN1P0C7U0 828 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 CD37P11049 281 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 GPD1P21695 349 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 FPR2P25090 351 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 SNCAP37840 140 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 RND2P52198 227 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 CDH12P55289 794 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 FOXA1P55317 472 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 BIDP55957 195 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 RPS13P62277 151 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 SSBP2P81877 361 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 RBBP7Q16576 425 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 EIPR1Q53HC9 387 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 PDZD11Q5EBL8 140 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 SFRP4Q6FHJ7 346 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 OR4A47Q6IF82 309 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 REEP3Q6NUK4 255 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 FAAP20Q6NZ36 180 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 NR2C2APQ86WQ0 139 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 KDM8Q8N371 416 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 WDTC1Q8N5D0 677 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TMEM156Q8N614 296 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 ACOT4Q8N9L9 421 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 INO80EQ8NBZ0 244 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 OR6N1Q8NGY5 312 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 SFXN5Q8TD22 340 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 ASB11Q8WXH4 323 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 ZCCHC14Q8WYQ9 949 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TMEM186Q96B77 213 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 OR7D2Q96RA2 312 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 LRFN3Q9BTN0 628 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 CPVLQ9H3G5 476 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TXNRD2Q9NNW7 524 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 CYTL1Q9NRR1 136 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 TUBD1Q9UJT1 453 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 FBXO4Q9UKT5 387 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 SNED1Q8TER0 1413 aa9.78□□□□□ -0.84
PDLIM5-210ENST00000508216 WDR90Q96KV7 1748 aa9.77□□□□□ -0.84
PDLIM5-210ENST00000508216 PPIAL4EA0A075B759 164 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 PPIAL4CA0A0B4J2A2 164 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 VSTM2BA6NLU5 285 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 OR11H12B2RN74 326 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 B4DEV8 164 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 PPIAL4DF5H284 164 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 SMIM22K7EJ46 135 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 AQP7O14520 342 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 SOCS6O14544 535 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 SLC16A5O15375 505 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms