RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CDK1P06493 297 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 OR2T7P0C7T2 308 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 CD79AP11912 226 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 C21orf33P30042 268 aaPredicted RBP12.38□□□□□ -0.43
RNF4-208ENST00000507247 CAPZA2P47755 286 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 GABARAPL2P60520 117 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 HIST1H3AP68431 136 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 HIST2H3PS2Q5TEC6 136 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 TMEM154Q6P9G4 183 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 HIST2H3AQ71DI3 136 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 STX19Q8N4C7 294 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 STEAP2Q8NFT2 490 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 OR2AJ1Q8NGZ0 328 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 OR2T27Q8NH04 317 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 OR52N5Q8NH56 324 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 ST7LQ8TDW4 575 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 IPCEF1Q8WWN9 437 aaPredicted RBP12.38□□□□□ -0.43
RNF4-208ENST00000507247 TMEM80Q96HE8 168 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 ABHD6Q9BV23 337 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 HDHD5Q9BXW7 423 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 ACTR6Q9GZN1 396 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 CCNB1IP1Q9NPC3 277 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 PNRC2Q9NPJ4 139 aaKnown RBP12.38□□□□□ -0.43
RNF4-208ENST00000507247 LAMP5Q9UJQ1 280 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 BLOC1S6Q9UL45 172 aa12.38□□□□□ -0.43
RNF4-208ENST00000507247 FLNBO75369 2602 aaKnown RBP12.37□□□□□ -0.43
RNF4-208ENST00000507247 IRGMA1A4Y4 181 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 WIPF3A6NGB9 483 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 ZNF670-ZNF695F2Z2N8 137 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 TMCC2O75069 709 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 MT-ND2P03891 347 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 LYNP07948 512 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 LIMS3P0CW19 117 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 LIMS4P0CW20 117 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 HOXB1P14653 301 aaPredicted RBP12.37□□□□□ -0.43
RNF4-208ENST00000507247 DCKP27707 260 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 ETV1P50549 477 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 CDH15P55291 814 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 UBE2NP61088 152 aaKnown RBP12.37□□□□□ -0.43
RNF4-208ENST00000507247 PSG4Q00888 419 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 SLC36A2Q495M3 483 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 KCTD21Q4G0X4 260 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 CCDC92Q53HC0 331 aaPredicted RBP12.37□□□□□ -0.43
RNF4-208ENST00000507247 TIMM23BQ5SRD1 257 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 SYT9Q86SS6 491 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 LHFPL3Q86UP9 236 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 MDP1Q86V88 176 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 ACBD7Q8N6N7 88 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 ZNF454Q8N9F8 522 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 AKR7LQ8NHP1 331 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 THEM6Q8WUY1 208 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 MYDGFQ969H8 173 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 NR1H4Q96RI1 486 aaPredicted RBP12.37□□□□□ -0.43
RNF4-208ENST00000507247 MNTQ99583 582 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 JAM3Q9BX67 310 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 OR2H1Q9GZK4 316 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 WNT5BQ9H1J7 359 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 KCNN2Q9H2S1 579 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 C1orf198Q9H425 327 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 RNF121Q9H920 327 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 ERVK13-1Q9NX77 482 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 PCDHGB1Q9Y5G3 927 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 SLC25A15Q9Y619 301 aa12.37□□□□□ -0.43
RNF4-208ENST00000507247 DAPL1A0PJW8 107 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 PSMD9O00233 223 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 MAGEB4O15481 346 aaPredicted RBP12.36□□□□□ -0.43
RNF4-208ENST00000507247 RGS10O43665 173 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 AGFG2O95081 481 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 UBL3O95164 117 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 TNFAIP8O95379 198 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 EEF1B2P24534 225 aaKnown RBP12.36□□□□□ -0.43
RNF4-208ENST00000507247 HOXC12P31275 282 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 PCBD1P61457 104 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 RAB1AP62820 205 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 ACTC1P68032 377 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 ACTA1P68133 377 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 SCRN3Q0VDG4 424 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 SNTB1Q13884 538 aaKnown RBP12.36□□□□□ -0.43
RNF4-208ENST00000507247 TAB1Q15750 504 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 GSG1Q2KHT4 349 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 PABPC1L2AQ5JQF8 200 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 ZNF774Q6NX45 483 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 SEZ6L2Q6UXD5 910 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 SPATC1Q76KD6 591 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 VASH1Q7L8A9 365 aaPredicted RBP12.36□□□□□ -0.43
RNF4-208ENST00000507247 CCDC36Q8IYA8 594 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 GJC3Q8NFK1 279 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 NANOS1Q8WY41 292 aaKnown RBP12.36□□□□□ -0.43
RNF4-208ENST00000507247 SLAMF6Q96DU3 332 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 WACQ9BTA9 647 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 OR10A4Q9H209 315 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 ZNF696Q9H7X3 374 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 NPDC1Q9NQX5 325 aaPredicted RBP12.36□□□□□ -0.43
RNF4-208ENST00000507247 CLEC2DQ9UHP7 191 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 AMDHD2Q9Y303 409 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 TIMM10BQ9Y5J6 103 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 TMEM14AQ9Y6G1 99 aa12.36□□□□□ -0.43
RNF4-208ENST00000507247 CLEC18AA5D8T8 446 aa12.35□□□□□ -0.43
RNF4-208ENST00000507247 SGCEO43556 437 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms