RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 SLC25A19Q9HC21 320 aa17.16■□□□□ 0.34
SNX25-204ENST00000506896 ASH2LQ9UBL3 628 aa17.16■□□□□ 0.34
SNX25-204ENST00000506896 FBXO9Q9UK97 447 aaPredicted RBP17.16■□□□□ 0.34
SNX25-204ENST00000506896 NDRG4Q9ULP0 352 aaKnown RBP17.16■□□□□ 0.34
SNX25-204ENST00000506896 OAZ3Q9UMX2 235 aa17.16■□□□□ 0.34
SNX25-204ENST00000506896 MPZL1O95297 269 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 HLA-DQA2P01906 255 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 OR4A8P0C604 315 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 PAICSP22234 425 aaKnown RBP17.15■□□□□ 0.34
SNX25-204ENST00000506896 GLRXP35754 106 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 PTH2RP49190 550 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 GDI2P50395 445 aaKnown RBP17.15■□□□□ 0.34
SNX25-204ENST00000506896 BLVRAP53004 296 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 CRISP1P54107 249 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 TEKQ02763 1124 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 EFNB3Q15768 340 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 KDM4DQ6B0I6 523 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 C11orf71Q6IPW1 123 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 VHLLQ6RSH7 139 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 GJC3Q8NFK1 279 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 KCNG2Q9UJ96 466 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 C2CD3Q4AC94 2353 aa17.15■□□□□ 0.34
SNX25-204ENST00000506896 B9A039 149 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 SGCEO43556 437 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 DOK2O60496 412 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 THBS4P35443 961 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 RAD52P43351 418 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 ZSCAN26Q16670 478 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 Q5PR19 223 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 ACSM5Q6NUN0 579 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 ZNF774Q6NX45 483 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 C1orf174Q8IYL3 243 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 ICA1LQ8NDH6 482 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 PERPQ96FX8 193 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 POM121L2Q96KW2 1035 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 PKP2Q99959 881 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 CDADC1Q9BWV3 514 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 PRRG3Q9BZD7 231 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 BCL2L14Q9BZR8 327 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 S100A14Q9HCY8 104 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 ATPIF1Q9UII2 106 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 CMAHPQ9Y471 501 aa17.14■□□□□ 0.33
SNX25-204ENST00000506896 NIPBLQ6KC79 2804 aaeCLIP17.13■□□□□ 0.33
SNX25-204ENST00000506896 C5orf49A4QMS7 147 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 FAM171A2A8MVW0 826 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 SURF4O15260 269 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 GPANK1O95872 356 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 TFP02787 698 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 CCL2P13500 99 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 ZNF823P16415 610 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 SPI1P17947 270 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 IGFBP5P24593 272 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 SNRPD2P62316 118 aaKnown RBP17.13■□□□□ 0.33
SNX25-204ENST00000506896 MEP1BQ16820 701 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 SWI5Q1ZZU3 235 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 ARL9Q6T311 187 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 PAQR4Q8N4S7 273 aaPredicted RBP17.13■□□□□ 0.33
SNX25-204ENST00000506896 OR9Q1Q8NGQ5 310 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 STMN2Q93045 179 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 PLEKHA8Q96JA3 519 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 RBM4BQ9BQ04 359 aaKnown RBP17.13■□□□□ 0.33
SNX25-204ENST00000506896 PLEK2Q9NYT0 353 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 EIF3KQ9UBQ5 218 aaKnown RBP17.13■□□□□ 0.33
SNX25-204ENST00000506896 LHFPL6Q9Y693 200 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 PMF1-BGLAPU3KQ54 211 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 NF1P21359 2839 aa17.13■□□□□ 0.33
SNX25-204ENST00000506896 LOC100509620A0A075B734 347 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 SAC3D1A6NKF1 404 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 H7C417 338 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 ICMTO60725 284 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 CCNOP22674 350 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 FMO3P31513 532 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 PYCR1P32322 319 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 HTR5AP47898 357 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 EVX1P49640 407 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 UCP2P55851 309 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 ATP5J2P56134 94 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 HIST1H3AP68431 136 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 PPP2R2BQ00005 443 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 PTGES3Q15185 160 aaKnown RBP17.12■□□□□ 0.33
SNX25-204ENST00000506896 RAB35Q15286 201 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 HIST2H3PS2Q5TEC6 136 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 HIST2H3AQ71DI3 136 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 VASH1Q7L8A9 365 aaPredicted RBP17.12■□□□□ 0.33
SNX25-204ENST00000506896 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.12■□□□□ 0.33
SNX25-204ENST00000506896 OR2AJ1Q8NGZ0 328 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 CACNG6Q9BXT2 260 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 HDHD2Q9H0R4 259 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 PLK3Q9H4B4 646 aa17.12■□□□□ 0.33
SNX25-204ENST00000506896 PRR23D1E9PI22 279 aaPredicted RBP17.11■□□□□ 0.33
SNX25-204ENST00000506896 SYNGR3O43761 229 aa17.11■□□□□ 0.33
SNX25-204ENST00000506896 GPRIN2O60269 458 aa17.11■□□□□ 0.33
SNX25-204ENST00000506896 PRR23D2P0DMB1 279 aaPredicted RBP17.11■□□□□ 0.33
SNX25-204ENST00000506896 GGT2P36268 569 aa17.11■□□□□ 0.33
SNX25-204ENST00000506896 CDKN1AP38936 164 aa17.11■□□□□ 0.33
SNX25-204ENST00000506896 MST1LQ2TV78 715 aa17.11■□□□□ 0.33
SNX25-204ENST00000506896 OR1F12Q8NHA8 337 aa17.11■□□□□ 0.33
SNX25-204ENST00000506896 IPCEF1Q8WWN9 437 aaPredicted RBP17.11■□□□□ 0.33
SNX25-204ENST00000506896 MRPL24Q96A35 216 aaKnown RBP17.11■□□□□ 0.33
SNX25-204ENST00000506896 BARX1Q9HBU1 254 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms