RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 YEATS2Q9ULM3 1422 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 HIVEP2P31629 2446 aa1.46□□□□□ -2.18
GYPB-207ENST00000506679 IGHV1OR15-9A0A0B4J2B8 117 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 TRIM64CA6NLI5 447 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 UBXN8O00124 270 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 PPP1R2P9O14990 202 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 CLIC3O95833 236 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 APCSP02743 223 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 CD74P04233 296 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 C1GALT1C1LP0DN25 315 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 ZNF250P15622 560 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 F2RP25116 425 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 FOXN2P32314 431 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 CX3CR1P49238 355 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 RND2P52198 227 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 ADARB1P78563 741 aaKnown RBP1.45□□□□□ -2.18
GYPB-207ENST00000506679 PRR3P79522 188 aaKnown RBP1.45□□□□□ -2.18
GYPB-207ENST00000506679 ZNF726P1Q15940 193 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 MAJINQ3KP22 176 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 VPS26BQ4G0F5 336 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 PTPN20Q4JDL3 420 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 SMUG1Q53HV7 270 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 AVPI1Q5T686 147 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 RNASEKQ6P5S7 137 aaKnown RBP1.45□□□□□ -2.18
GYPB-207ENST00000506679 TMEM107Q6UX40 140 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 TAS2R42Q7RTR8 314 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 LIX1Q8N485 282 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 OR2A1Q8NGT9 310 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 OR8U1Q8NH10 309 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 COQ8AQ8NI60 647 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 KCNG3Q8TAE7 436 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 NTAN1Q96AB6 310 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 RBMXL1Q96E39 390 aaKnown RBP1.45□□□□□ -2.18
GYPB-207ENST00000506679 L3HYPDHQ96EM0 354 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 ATP5SQ99766 215 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 LZTS2Q9BRK4 669 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 OR51M1Q9H341 326 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 KCNJ16Q9NPI9 418 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 SLC2A8Q9NY64 477 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 CTSFQ9UBX1 484 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 VANGL2Q9ULK5 521 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 SIGLEC9Q9Y336 463 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 RRP15Q9Y3B9 282 aaKnown RBP1.45□□□□□ -2.18
GYPB-207ENST00000506679 GOLT1BQ9Y3E0 138 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 TSSC4Q9Y5U2 329 aaPredicted RBP1.45□□□□□ -2.18
GYPB-207ENST00000506679 SHANK1Q9Y566 2161 aa1.45□□□□□ -2.18
GYPB-207ENST00000506679 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.44□□□□□ -2.18
GYPB-207ENST00000506679 ZNF850A8MQ14 1090 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 HLA-DQA1P01909 254 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 OR56A5P0C7T3 313 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 RNASE2P10153 161 aaKnown RBP1.44□□□□□ -2.18
GYPB-207ENST00000506679 SSTR5P35346 364 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 CXCL12P48061 93 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 SLC11A1P49279 550 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 TMED10P49755 219 aaKnown RBP1.44□□□□□ -2.18
GYPB-207ENST00000506679 ACTR3P61158 418 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 CDH17Q12864 832 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 OR7A5Q15622 319 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 IGFBP7Q16270 282 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 ORMDL2Q53FV1 153 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 METTL21CQ5VZV1 264 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 SAXO2Q658L1 398 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 SLC16A13Q7RTY0 426 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 CALHM1Q8IU99 346 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 CDKL3Q8IVW4 592 aaPredicted RBP1.44□□□□□ -2.18
GYPB-207ENST00000506679 PRSS58Q8IYP2 241 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 OR4K5Q8NGD3 323 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 OR6N1Q8NGY5 312 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 LINC01560Q8TB33 94 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 CIRBP-AS1Q8TBR5 109 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 ZNF502Q8TBZ5 544 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 PIFOQ8TCI5 191 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 SLC7A13Q8TCU3 470 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 SLC2A14Q8TDB8 520 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 FBXO32Q969P5 355 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 FLYWCH2Q96CP2 140 aaKnown RBP1.44□□□□□ -2.18
GYPB-207ENST00000506679 CNDP1Q96KN2 507 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 RNF157Q96PX1 679 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 DOK1Q99704 481 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 FOXC2Q99958 501 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 OR52D1Q9H346 318 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 FAM49BQ9NUQ9 324 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 RABL2BQ9UNT1 228 aa1.44□□□□□ -2.18
GYPB-207ENST00000506679 XKRY2A2RUG3 117 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 LRRIQ3A6PVS8 624 aaPredicted RBP1.43□□□□□ -2.18
GYPB-207ENST00000506679 DNASE2O00115 360 aaPredicted RBP1.43□□□□□ -2.18
GYPB-207ENST00000506679 AP3B1O00203 1094 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 RAB29O14966 203 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 NUPL2O15504 423 aaKnown RBP1.43□□□□□ -2.18
GYPB-207ENST00000506679 KLHL41O60662 606 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 WBP4O75554 376 aaKnown RBP1.43□□□□□ -2.18
GYPB-207ENST00000506679 CIB2O75838 187 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 SERPINA5P05154 406 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 CTSLP07711 333 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 TPM2P07951 284 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 CD3GP09693 182 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 WARSP23381 471 aaKnown RBP1.43□□□□□ -2.18
GYPB-207ENST00000506679 DTYMKP23919 212 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 CHMLP26374 656 aa1.43□□□□□ -2.18
GYPB-207ENST00000506679 DCKP27707 260 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms