RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ZNF774Q6NX45 483 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 ASRGL1Q7L266 308 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 ALDH16A1Q8IZ83 802 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 HS3ST5Q8IZT8 346 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 SVOPLQ8N434 492 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 PAQR4Q8N4S7 273 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-209ENST00000506630 ICA1LQ8NDH6 482 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 CPEB3Q8NE35 698 aaKnown RBP11.3□□□□□ -0.6
TCOF1-209ENST00000506630 OR2T33Q8NG76 320 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 TEX47Q8TBZ9 253 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 C11orf40Q8WZ69 217 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 OR2H1Q9GZK4 316 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 WNT5BQ9H1J7 359 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 ZNF556Q9HAH1 456 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 KIF17Q9P2E2 1029 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 B9D1Q9UPM9 204 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 TIMM10BQ9Y5J6 103 aa11.3□□□□□ -0.6
TCOF1-209ENST00000506630 SONP18583 2426 aaKnown RBP11.3□□□□□ -0.6
TCOF1-209ENST00000506630 IGLV1-36A0A0B4J1U3 117 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 OR6C68A6NDL8 312 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 H7C417 338 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 CD5LO43866 347 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 SSX4O60224 188 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 DOK2O60496 412 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 MPZL1O95297 269 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 SNAP29O95721 258 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 GDI2P50395 445 aaKnown RBP11.29□□□□□ -0.6
TCOF1-209ENST00000506630 NUDT6P53370 316 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 COX10Q12887 443 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 AQP6Q13520 282 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 CCNIQ14094 377 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 EFNB3Q15768 340 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 MST1LQ2TV78 715 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 SLC36A3Q495N2 470 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 SYT9Q86SS6 491 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 OR6V1Q8N148 313 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 CYB561A3Q8NBI2 242 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 OR10H5Q8NGA6 315 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 OR4Q3Q8NH05 313 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 MRPL24Q96A35 216 aaKnown RBP11.29□□□□□ -0.6
TCOF1-209ENST00000506630 VRK1Q99986 396 aaPredicted RBP11.29□□□□□ -0.6
TCOF1-209ENST00000506630 SYT3Q9BQG1 590 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 WACQ9BTA9 647 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 RACGAP1Q9H0H5 632 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 BARX1Q9HBU1 254 aaPredicted RBP11.29□□□□□ -0.6
TCOF1-209ENST00000506630 ASH2LQ9UBL3 628 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 FZR1Q9UM11 496 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 BAIAP2Q9UQB8 552 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 NBEAL1Q6ZS30 2694 aa11.29□□□□□ -0.6
TCOF1-209ENST00000506630 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
TCOF1-209ENST00000506630 C5orf49A4QMS7 147 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 A8MV72 311 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-209ENST00000506630 PHF1O43189 567 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-209ENST00000506630 SGCEO43556 437 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 HLA-DQA2P01906 255 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 LCKP06239 509 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 GAAP10253 952 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 PRKACGP22612 351 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 POU1F1P28069 291 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 HTR5AP47898 357 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 LSM6P62312 80 aaKnown RBP11.28□□□□□ -0.6
TCOF1-209ENST00000506630 GLO1Q04760 184 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 MEP1BQ16820 701 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 RGS7BPQ6MZT1 257 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-209ENST00000506630 SHQ1Q6PI26 577 aaKnown RBP11.28□□□□□ -0.6
TCOF1-209ENST00000506630 CD300LDQ6UXZ3 194 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 LNX2Q8N448 690 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 IQCF1Q8N6M8 205 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 ATG16L2Q8NAA4 619 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 SLC37A3Q8NCC5 494 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 NPEPL1Q8NDH3 523 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 UTP4Q969X6 686 aaKnown RBP11.28□□□□□ -0.6
TCOF1-209ENST00000506630 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 MRPL37Q9BZE1 423 aaKnown RBP11.28□□□□□ -0.6
TCOF1-209ENST00000506630 BCL2L14Q9BZR8 327 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 DYNLRB1Q9NP97 96 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 PLEK2Q9NYT0 353 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 KLHL21Q9UJP4 597 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 NDRG4Q9ULP0 352 aaKnown RBP11.28□□□□□ -0.6
TCOF1-209ENST00000506630 FKBP7Q9Y680 259 aa11.28□□□□□ -0.6
TCOF1-209ENST00000506630 LOC100509620A0A075B734 347 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 GPR37O15354 613 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 IFNGP01579 166 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 ANXA8P13928 327 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 FASP25445 335 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 PYCR1P32322 319 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 RAD52P43351 418 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 PPOXP50336 477 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 ERVS71-1P61550 626 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 CRMP1Q14194 572 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 ATP6AP1Q15904 470 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 MSMPQ1L6U9 139 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 ZBTB46Q86UZ6 589 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 PROKR2Q8NFJ6 384 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 OR9Q1Q8NGQ5 310 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 OR1J1Q8NGS3 322 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 OR5K1Q8NHB7 308 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 SORCS2Q96PQ0 1159 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 NTN4Q9HB63 628 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 EIF3KQ9UBQ5 218 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms