RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 B3GALT2O43825 422 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 CLN5O75503 358 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 SLC35G6P0C7Q6 338 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ALOX5APP20292 161 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ADH6P28332 368 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 AQP2P41181 271 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 CENPAP49450 140 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 OR7A5Q15622 319 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 TRMT12Q53H54 448 aaKnown RBP14.34□□□□□ -0.11
SCLT1-208ENST00000506368 LY6G5CQ5SRR4 150 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 ZNF585AQ6P3V2 769 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 STX12Q86Y82 276 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 KREMEN2Q8NCW0 462 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 OR4E2Q8NGC2 313 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 SNIP1Q8TAD8 396 aaKnown RBP14.34□□□□□ -0.11
SCLT1-208ENST00000506368 KIRREL1Q96J84 757 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 CLCC1Q96S66 551 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 MAP3K3Q99759 626 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 NUDT16L1Q9BRJ7 211 aaKnown RBP14.34□□□□□ -0.11
SCLT1-208ENST00000506368 TIMM29Q9BSF4 260 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 HIF3AQ9Y2N7 669 aa14.34□□□□□ -0.11
SCLT1-208ENST00000506368 COL4A2P08572 1712 aa14.33□□□□□ -0.11
SCLT1-208ENST00000506368 NPIPA5A0A0B4J1W7 369 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 OR2W5A6NFC9 320 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 FAM157AC9JC47 383 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 NPIPA7E9PJI5 369 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 LDLRAD4O15165 306 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 ST8SIA5O15466 376 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 STK17BO94768 372 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 IFNA17P01571 189 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 NPIPA8P0DM63 369 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 RAB5AP20339 215 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 SKP1P63208 163 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 DEFA6Q01524 100 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 CCINQ13939 588 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 RHEBQ15382 184 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 MLF2Q15773 248 aaPredicted RBP14.33□□□□□ -0.12
SCLT1-208ENST00000506368 OR2B11Q5JQS5 317 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 FIGNL1Q6PIW4 674 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 BTNL8Q6UX41 500 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 HIST2H3AQ71DI3 136 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 DTWD2Q8NBA8 298 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 AQP3Q92482 292 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 RASD2Q96D21 266 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 PTCHD1Q96NR3 888 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 RNF126Q9BV68 326 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 UCK1Q9HA47 277 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 LYRM4Q9HD34 91 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 DAPP1Q9UN19 280 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 FARSAQ9Y285 508 aaKnown RBP14.33□□□□□ -0.12
SCLT1-208ENST00000506368 SLC22A7Q9Y694 548 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 C2orf16Q68DN1 1984 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 TICRRQ7Z2Z1 1910 aa14.33□□□□□ -0.12
SCLT1-208ENST00000506368 EEF1E1-BLOC1S5C9J1V9 151 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 EFSO43281 561 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 OR8U8P0C7N1 319 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 SMIM10L1P0DMW3 83 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 SLC2A1P11166 492 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 CBR1P16152 277 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 LAP3P28838 519 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 GRPRP30550 384 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 GABRA3P34903 492 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 GRK6P43250 576 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 HTR5AP47898 357 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 GSK3AP49840 483 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 PRSS35Q8N3Z0 413 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 NKAIN3Q8N8D7 197 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 ZSCAN4Q8NAM6 433 aaPredicted RBP14.32□□□□□ -0.12
SCLT1-208ENST00000506368 ZNF511Q8NB15 262 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 LYPD6BQ8NI32 183 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 ZPLD1Q8TCW7 415 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 RAB3CQ96E17 227 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 SMIM10Q96HG1 83 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 TOLLIPQ9H0E2 274 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 LMAN1LQ9HAT1 526 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 RPS10P5Q9NQ39 176 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 FBXO34Q9NWN3 711 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 PPP4R1LQ9P1A2 415 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 MRPS33Q9Y291 106 aaKnown RBP14.32□□□□□ -0.12
SCLT1-208ENST00000506368 KLHDC2Q9Y2U9 406 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 EDDM13A0A1B0GTR0 161 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 CPED1A4D0V7 1026 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 STATHP02808 62 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 C8AP07357 584 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 ZNF888P0CJ79 500 aaPredicted RBP14.32□□□□□ -0.12
SCLT1-208ENST00000506368 HKR1P10072 659 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 AVPR2P30518 371 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 CCKBRP32239 447 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 SERPINF1P36955 418 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 CDKN2AP42771 156 aaKnown RBP14.32□□□□□ -0.12
SCLT1-208ENST00000506368 SNRPNP63162 240 aaKnown RBP14.32□□□□□ -0.12
SCLT1-208ENST00000506368 HGFACQ04756 655 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 DMWDQ09019 674 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 ELAVL3Q14576 367 aaKnown RBP14.32□□□□□ -0.12
SCLT1-208ENST00000506368 ELAVL1Q15717 326 aaKnown RBP14.32□□□□□ -0.12
SCLT1-208ENST00000506368 ZNF141Q15928 474 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 ACER2Q5QJU3 275 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 NUP54Q7Z3B4 507 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 ZNF440Q8IYI8 595 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 OR52E1Q8NGJ3 308 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms