RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CGGBP1Q9UFW8 167 aaPredicted RBP2.62□□□□□ -1.99
TCOF1-208ENST00000506063 IL19Q9UHD0 177 aa2.62□□□□□ -1.99
TCOF1-208ENST00000506063 OSGIN1Q9UJX0 560 aa2.62□□□□□ -1.99
TCOF1-208ENST00000506063 EMCNQ9ULC0 261 aa2.62□□□□□ -1.99
TCOF1-208ENST00000506063 TMCC3Q9ULS5 477 aa2.62□□□□□ -1.99
TCOF1-208ENST00000506063 PCDHGB4Q9UN71 923 aa2.62□□□□□ -1.99
TCOF1-208ENST00000506063 RAP2CQ9Y3L5 183 aa2.62□□□□□ -1.99
TCOF1-208ENST00000506063 TIMM22Q9Y584 194 aa2.62□□□□□ -1.99
TCOF1-208ENST00000506063 LYVE1Q9Y5Y7 322 aa2.62□□□□□ -1.99
TCOF1-208ENST00000506063 KCNE3Q9Y6H6 103 aa2.62□□□□□ -1.99
TCOF1-208ENST00000506063 LOC100509620A0A075B734 347 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TMED7-TICAM2A0A0A6YYA0 188 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 RNF103-CHMP3A0A140T963 221 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 WDR91A4D1P6 747 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TMEM247A6NEH6 219 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 NUDT19A8MXV4 375 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 HMGB1P1B2RPK0 211 aaPredicted RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TMEM233B4DJY2 109 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 FTCDNL1E5RQL4 147 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 E9PBE3 544 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 H3BNH8 94 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 M0R3G1 203 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 CCL24O00175 119 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 GTPBP1O00178 669 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 ANKRD28O15084 1053 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 LSM1O15116 133 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 POLR3GO15318 223 aaPredicted RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 CFLARO15519 480 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 AKAP10O43572 662 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TYROBPO43914 113 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 NPIPB7O75200 414 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 PEX14O75381 377 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 UBL3O95164 117 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 AK1P00568 194 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 AMY1AP04745 511 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 AMY2AP04746 511 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 IFNA6P05013 189 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 VIMP08670 466 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 MMP7P09237 267 aaPredicted RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 SBK3P0C264 359 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 LINC00032P0C843 101 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 DUX4L4P0CJ87 422 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 PRPS2P11908 318 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 CHN1P15882 459 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 SDC1P18827 310 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TNFRSF1AP19438 455 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 PRPS1L1P21108 318 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 BGNP21810 368 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 EEF1B2P24534 225 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 FKBP2P26885 142 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 SLC6A1P30531 599 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 SLC1A6P48664 564 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 CEBPDP49716 269 aaPredicted RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 RGS6P49758 472 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 ERFP50548 548 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 RPL14P50914 215 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 RAB13P51153 203 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 ABCE1P61221 599 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 MAGOHP61326 146 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 POU6F2P78424 691 aaPredicted RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 C2orf80Q0P641 193 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 STX3Q13277 289 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 CAMK2DQ13557 499 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TP53BP2Q13625 1128 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 SELPLGQ14242 412 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 CASP8Q14790 479 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 OR7A5Q15622 319 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF141Q15928 474 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 MAPK14Q16539 360 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 DEFB136Q30KP8 78 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 LSM12Q3MHD2 195 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF718Q3SXZ3 478 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF260Q3ZCT1 412 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 XKR7Q5GH72 579 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 CLEC12AQ5QGZ9 265 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 PDZK1Q5T2W1 519 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 NOXRED1Q6NXP6 359 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 WDR88Q6ZMY6 472 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 LINC00322Q6ZN03 302 aaPredicted RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 OLIG3Q7RTU3 272 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 HDXQ7Z353 690 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TRIM46Q7Z4K8 759 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 CENPVQ7Z7K6 275 aaPredicted RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 C20orf196Q8IYI0 205 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 LRRC34Q8IZ02 419 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TRIML2Q8N7C3 387 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF645Q8N7E2 425 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 VPS37AQ8NEZ2 397 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 OR2Z1Q8NG97 314 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 OR4X2Q8NGF9 303 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 OR51G2Q8NGK0 314 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 CLHC1Q8NHS4 586 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 SFXN5Q8TD22 340 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 LRRC8CQ8TDW0 803 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TSEN15Q8WW01 171 aaKnown RBP2.61□□□□□ -1.99
TCOF1-208ENST00000506063 TMEM234Q8WY98 164 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 ARL8AQ96BM9 186 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 MTERF3Q96E29 417 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 APIPQ96GX9 242 aa2.61□□□□□ -1.99
TCOF1-208ENST00000506063 MEGF10Q96KG7 1140 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms