RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 MADCAM1Q13477 382 aa15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 CAMK2DQ13557 499 aa15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 TATDN3Q17R31 274 aa15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 TMEM69Q5SWH9 247 aa15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 OR51A4Q8NGJ6 313 aa15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 OR10AC1Q8NH08 325 aa15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 ZFP3Q96NJ6 502 aa15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 GNRHR2Q96P88 292 aa15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 ACTR6Q9GZN1 396 aa15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 PAIP2BQ9ULR5 123 aaKnown RBP15.37■□□□□ 0.05
TRAPPC11-204ENST00000505676 NPIPA2E9PIF3 369 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 INMT-MINDY4F8WBC2 141 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 NPIPA3F8WFD2 350 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 DHFRP00374 187 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 CASRP41180 1078 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 RAC3P60763 192 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 PSMA6P60900 246 aaKnown RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 GRB2P62993 217 aaKnown RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 FOXL2NBQ6ZUU3 175 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 KRT74Q7RTS7 529 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 ELMOD2Q8IZ81 293 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 OR13C3Q8NGS6 347 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 FCAMRQ8WWV6 532 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 SLC7A6Q92536 515 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 TMEM54Q969K7 222 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 EDEM2Q9BV94 578 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 FAM206AQ9NX38 181 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 GLTPQ9NZD2 209 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 ZDBF2Q9HCK1 2354 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 LOC100289279A0A1B0GTE1 492 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 LOC107986453A0A1B0GWG9 222 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 KRT33AO76009 404 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 CSNK1A1P48729 337 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 SUCLG1P53597 346 aaKnown RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 GABREP78334 506 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 CD300CQ08708 224 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 C19orf57Q0VDD7 668 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 Q0VFX4 171 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 CBX3Q13185 183 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 LRFN4Q6PJG9 635 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 CREB3L2Q70SY1 520 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 LINGO2Q7L985 606 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 LINC00346Q8IVM7 164 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 OR6M1Q8NGM8 313 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 ORAI1Q96D31 301 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 JSRP1Q96MG2 331 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 SMAD5Q99717 465 aaKnown RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 TRAF4Q9BUZ4 470 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 DIABLOQ9NR28 239 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 CENPMQ9NSP4 180 aa15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 NUFIP1Q9UHK0 495 aaKnown RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 GDF2Q9UK05 429 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 BOKQ9UMX3 212 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 MRPS7Q9Y2R9 242 aaKnown RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 RBMX2Q9Y388 322 aaKnown RBP15.36■□□□□ 0.05
TRAPPC11-204ENST00000505676 A0A0A6YYH2 397 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 A6NJ64 397 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 XRCC3O43542 346 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 LANCL1O43813 399 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 CSRP1P21291 193 aaKnown RBP15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 MAGEB1P43366 347 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 RPS18P62269 152 aaKnown RBP15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 SSBP1Q04837 148 aaKnown RBP15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 KLF9Q13886 244 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 FAM166AQ6J272 317 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 ANKRD16Q6P6B7 361 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 BEST3Q8N1M1 668 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 PTX4Q96A99 478 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 OR2B2Q9GZK3 357 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 EMC3Q9P0I2 261 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 CLEC4AQ9UMR7 237 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 RCE1Q9Y256 329 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 TERTO14746 1132 aaKnown RBP15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 QDPRP09417 244 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 CNR1P21554 472 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 TCEA1P23193 301 aaKnown RBP15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 CLDN17P56750 224 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 DGCR2P98153 550 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 DNM1P46Q6ZS02 220 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 ESPNLQ6ZVH7 1005 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 CCDC54Q8NEL0 328 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 UPRTQ96BW1 309 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 TAS2R8Q9NYW2 309 aa15.35■□□□□ 0.05
TRAPPC11-204ENST00000505676 CTSSP25774 331 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 HSD11B1P28845 292 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 DLSTP36957 453 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 GDNFP39905 211 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 CARTPTQ16568 116 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 SIAH3Q8IW03 269 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 WDFY1Q8IWB7 410 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 UBE2J2Q8N2K1 259 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 OR9K2Q8NGE7 335 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 RELTQ969Z4 430 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 PHF21AQ96BD5 680 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 SEC61A2Q9H9S3 476 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 ITGB1BP2Q9UKP3 347 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 LHFPL6Q9Y693 200 aa15.34■□□□□ 0.05
TRAPPC11-204ENST00000505676 A0A087WV48 116 aa15.33■□□□□ 0.05
TRAPPC11-204ENST00000505676 LOC390937A0A1W2PQ73 354 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms