RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 COL8A2P25067 703 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 ERFP50548 548 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 PPP1CBP62140 327 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 SCRN3Q0VDG4 424 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 CCNIQ14094 377 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 TRIP10Q15642 601 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 TSTQ16762 297 aaKnown RBP12.2□□□□□ -0.46
HOXC9-202ENST00000504557 FAM98BQ52LJ0 330 aaKnown RBP12.2□□□□□ -0.46
HOXC9-202ENST00000504557 MTX3Q5HYI7 312 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 C6orf52Q5T4I8 152 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 LCN8Q6JVE9 175 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 TRPM8Q7Z2W7 1104 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 GLB1L2Q8IW92 636 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 ARHGAP24Q8N264 748 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 ZNF786Q8N393 782 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 IPCEF1Q8WWN9 437 aaPredicted RBP12.2□□□□□ -0.46
HOXC9-202ENST00000504557 C4orf45Q96LM5 186 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 BTBD10Q9BSF8 475 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 OR2J1Q9GZK6 312 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 HINT3Q9NQE9 182 aaKnown RBP12.2□□□□□ -0.46
HOXC9-202ENST00000504557 RPRD1BQ9NQG5 326 aaKnown RBP12.2□□□□□ -0.46
HOXC9-202ENST00000504557 TAS2R1Q9NYW7 299 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 VSX1Q9NZR4 365 aaPredicted RBP12.2□□□□□ -0.46
HOXC9-202ENST00000504557 ASH2LQ9UBL3 628 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 GPR160Q9UJ42 338 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 PRPF19Q9UMS4 504 aaKnown RBP12.2□□□□□ -0.46
HOXC9-202ENST00000504557 GRIP1Q9Y3R0 1128 aa12.2□□□□□ -0.46
HOXC9-202ENST00000504557 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.2□□□□□ -0.46
HOXC9-202ENST00000504557 SPRY3O43610 288 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 AHCYL1O43865 530 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 KRT36O76013 467 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 UBOX5O94941 541 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 HLA-DQA2P01906 255 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 ZNF250P15622 560 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 GSSP48637 474 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 TSPAN31Q12999 210 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 AQP6Q13520 282 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 ZNF718Q3SXZ3 478 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 ELFN2Q5R3F8 820 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 DNM1P34Q6PK57 102 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 CORO6Q6QEF8 472 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 ZNF620Q6ZNG0 422 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 PRIMA1Q86XR5 153 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 AQP11Q8NBQ7 271 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 ZNF540Q8NDQ6 660 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 OR52L1Q8NGH7 329 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 OR52E2Q8NGJ4 325 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 MUC13Q9H3R2 512 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 REEP1Q9H902 201 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 TBC1D23Q9NUY8 699 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 VNN3Q9NY84 501 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 SLCO1C1Q9NYB5 712 aa12.19□□□□□ -0.46
HOXC9-202ENST00000504557 NDRG4Q9ULP0 352 aaKnown RBP12.19□□□□□ -0.46
HOXC9-202ENST00000504557 SAMHD1Q9Y3Z3 626 aaKnown RBP12.19□□□□□ -0.46
HOXC9-202ENST00000504557 IGLV3-9A0A075B6K5 115 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 LOC100289279A0A1B0GTE1 492 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 C17orf100A8MU93 164 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 RER1O15258 196 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 GYG2O15488 501 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 PPIHO43447 177 aaKnown RBP12.18□□□□□ -0.46
HOXC9-202ENST00000504557 CRLF1O75462 422 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 SOX14O95416 240 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 TXNDC12O95881 172 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 GASTP01350 101 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 MT-ND5P03915 603 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 ZNF23P17027 643 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 CRABP1P29762 137 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 IL2RGP31785 369 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 GZMKP49863 264 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 ARHGDIAP52565 204 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.18□□□□□ -0.46
HOXC9-202ENST00000504557 UNQ6126/PRO20091Q6UXV3 157 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 IL17RELQ6ZVW7 336 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 ZNF771Q7L3S4 317 aaPredicted RBP12.18□□□□□ -0.46
HOXC9-202ENST00000504557 VASH1Q7L8A9 365 aaPredicted RBP12.18□□□□□ -0.46
HOXC9-202ENST00000504557 LINC00346Q8IVM7 164 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 CYB561A3Q8NBI2 242 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 KLF14Q8TD94 323 aaPredicted RBP12.18□□□□□ -0.46
HOXC9-202ENST00000504557 YIPF5Q969M3 257 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 ASB9Q96DX5 294 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 MARS2Q96GW9 593 aaKnown RBP12.18□□□□□ -0.46
HOXC9-202ENST00000504557 SOX7Q9BT81 388 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 PLA2G12AQ9BZM1 189 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 POFUT1Q9H488 388 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 ELOVL3Q9HB03 270 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 DECR2Q9NUI1 292 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 TREM2Q9NZC2 230 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 B9D1Q9UPM9 204 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 DYSFO75923 2080 aa12.18□□□□□ -0.46
HOXC9-202ENST00000504557 PLSCR5A0PG75 271 aa12.17□□□□□ -0.46
HOXC9-202ENST00000504557 OR6C68A6NDL8 312 aa12.17□□□□□ -0.46
HOXC9-202ENST00000504557 KIAA1324LA8MWY0 1029 aaPredicted RBP12.17□□□□□ -0.46
HOXC9-202ENST00000504557 TIMM8AO60220 97 aaPredicted RBP12.17□□□□□ -0.46
HOXC9-202ENST00000504557 TGFAP01135 160 aa12.17□□□□□ -0.46
HOXC9-202ENST00000504557 DBHP09172 617 aa12.17□□□□□ -0.46
HOXC9-202ENST00000504557 GIFP27352 417 aa12.17□□□□□ -0.46
HOXC9-202ENST00000504557 MAGEA2P43356 314 aa12.17□□□□□ -0.46
HOXC9-202ENST00000504557 GPR6P46095 362 aaPredicted RBP12.17□□□□□ -0.46
HOXC9-202ENST00000504557 ZNF81P51508 661 aa12.17□□□□□ -0.46
HOXC9-202ENST00000504557 CHN2P52757 468 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms