RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CDH11P55287 796 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 SNRPGP62308 76 aaKnown RBP11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 DAZAP2Q15038 168 aaPredicted RBP11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 BEX5Q5H9J7 111 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC35D3Q5M8T2 416 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 NCMAPQ5T1S8 102 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC18B1Q6NT16 456 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 SPATC1Q76KD6 591 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 SHFQ7M4L6 423 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 TIGD4Q8IY51 512 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 DEPDC4Q8N2C3 294 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 CNIH3Q8TBE1 160 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 APH1BQ8WW43 257 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 TRUB1Q8WWH5 349 aaKnown RBP11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 TFAP2CQ92754 450 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 NEUROG1Q92886 237 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 MARVELD3Q96A59 401 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 INTS14Q96SY0 518 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 APOL4Q9BPW4 351 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 VCX3BQ9H321 246 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 CYB5R1Q9UHQ9 305 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 KCNG2Q9UJ96 466 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 GDF2Q9UK05 429 aaPredicted RBP11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 KLHDC2Q9Y2U9 406 aa11.52□□□□□ -0.57
PDLIM7-212ENST00000504380 A0A1W2PPR1 153 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 H0YAE9 185 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 ABCD4O14678 606 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 SGCEO43556 437 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 DOK2O60496 412 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 IGKV3-15P01624 115 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 HRGP04196 525 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 PRF1P14222 555 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 PCBD1P61457 104 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 AQP6Q13520 282 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 MAD2L1BPQ15013 274 aaPredicted RBP11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 SNCBQ16143 134 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 OCLNQ16625 522 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 SMN1Q16637 294 aaKnown RBP11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 LCN1P1Q5VSP4 162 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 ADAM5Q6NVV9 412 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 VASH1Q7L8A9 365 aaPredicted RBP11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 DPY19L4Q7Z388 723 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 GID4Q8IVV7 300 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 PIAS4Q8N2W9 510 aaPredicted RBP11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 PAQR4Q8N4S7 273 aaPredicted RBP11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 KBTBD8Q8NFY9 601 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 OR2AJ1Q8NGZ0 328 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC7A6Q92536 515 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 MAP6Q96JE9 813 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 RADILQ96JH8 1075 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 AMELYQ99218 206 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 TTTY10Q9BZA0 68 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 MARCH7Q9H992 704 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 AMBNQ9NP70 447 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 NGBQ9NPG2 151 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 CLN6Q9NWW5 311 aa11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
PDLIM7-212ENST00000504380 HEATR1Q9H583 2144 aaKnown RBP11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 RTTNQ86VV8 2226 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 LOC100509620A0A075B734 347 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 IQCMA0A1B0GVH7 501 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 ATP6V1G2-DDX39BF2Z307 99 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 H0YJX3 145 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 SERPINA5P05154 406 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 CD3EP07766 207 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 CCNOP22674 350 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 HTR1FP30939 366 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 BLVRAP53004 296 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 ISL1P61371 349 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 HIST1H3AP68431 136 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 NAAAQ02083 359 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 TLE4Q04727 773 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 PLP2Q04941 152 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 SCRN3Q0VDG4 424 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 EIF2B1Q14232 305 aaKnown RBP11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 HIST2H3PS2Q5TEC6 136 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 TMEM108Q6UXF1 575 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 USP51Q70EK9 711 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 HIST2H3AQ71DI3 136 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 DCXRQ7Z4W1 244 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 DPPA2Q7Z7J5 298 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 SYT9Q86SS6 491 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 RFLNBQ8N5W9 214 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC30A7Q8NEW0 376 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 OR51G2Q8NGK0 314 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 OR10S1Q8NGN2 331 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 THEM6Q8WUY1 208 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 TBX5Q99593 518 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 OR51B6Q9H340 312 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 ESRP2Q9H6T0 727 aaKnown RBP11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 ADGRL4Q9HBW9 690 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 PLEK2Q9NYT0 353 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 COPS3Q9UNS2 423 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 CADP27708 2225 aa11.5□□□□□ -0.57
PDLIM7-212ENST00000504380 ADGRG4Q8IZF6 3080 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 IGHV2OR16-5A0A0B4J2B6 119 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 SLC22A31A6NKX4 558 aa11.49□□□□□ -0.57
PDLIM7-212ENST00000504380 CTAG2O75638 210 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms